BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZB08RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig918 1195 0.0 >3x_Contig918 Length = 2482 Score = 1195 bits (603), Expect = 0.0 Identities = 640/649 (98%), Gaps = 3/649 (0%) Strand = Plus / Plus Query: 46 caagtacggccaatacttcgatgtacatacctgctggtttgactccgccggtcttattgg 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1836 caagtacggccaatacttcgatgtacatacctgctggtttgactccgccggtcttattgg 1895 Query: 106 ctattaatctggattttacagcaccaatcgcaatttccccgtaatatgctagctgtgcat 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1896 ctattaatctggattttacagcaccaatcgcaatttccccgtaatatgctagctgtgcat 1955 Query: 166 agaatactcctttcgcattcttgtccacaacttcctcgaagtattcacctggatactgaa 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1956 agaatactcctttcgcattcttgtccacaacttcctcgaagtattcacctggatactgaa 2015 Query: 226 ccggtagcacaacatcaatgatctttctgaatgttcctaaattgttagcgtaaacgttat 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2016 ccggtagcacaacatcaatgatctttctgaatgttcctaaattgttagcgtaaacgttat 2075 Query: 286 caatcgtaaccaatgctctacccatcttctcaattgtctatatatggataccttacctgc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2076 caatcgtaaccaatgctctacccatcttctcaattgtctatatatggataccttacctgc 2135 Query: 346 tgattctcaacgtacagaaagtactggtttctagcagtaattcttgtcattgtatctctc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2136 tgattctcaacgtacagaaagtactggtttctagcagtaattcttgtcattgtatctctc 2195 Query: 406 ttgaagatattatttcttcggattataagttctatggaattttcaaatcaactgtgtatc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2196 ttgaagatattatttcttcggattataagttctatggaattttcaaatcaactgtgtatc 2255 Query: 466 tcaggatcgaaacagcgaacaatgttaaaatcgagagtgtaataccagataccagcctta 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2256 tcaggatcgaaacagcgaacaatgttaaaatcgagagtgtaataccagataccagcctta 2315 Query: 526 gatacactgttagaatttcctctaaactgccaaaacaacgaaaccaatctaacatcgatg 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2316 gatacactgttagaatttcctctaaactgccaaaacaacgaaaccaatctaacatcgatg 2375 Query: 586 ctcaaatgcataaactatncataacggacattccataccacttatttnncaactagc-aa 644 |||||||||||||||||| ||||||||||||||||||||||||| |||||||| || Sbjct: 2376 ctcaaatgcataaactatcataaacggacattccataccacttattt-ccaactagcaaa 2434 Query: 645 gggaaatgtgtcttgggatatggcaattggatcccgctatacccaaaga 693 |||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 2435 gggaaatgtgtcttggaatatggc-attggatcccgctatacccaaaga 2482 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5841 Number of Sequences: 1807 Number of extensions: 5841 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)