BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC10ZB12FM1.SCF screened BAC_end
         (981 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1637                                                        1009   0.0  
3x_Contig790                                                          349   7e-96

>3x_Contig1637 
          Length = 14855

 Score = 1009 bits (509), Expect = 0.0
 Identities = 610/630 (96%), Gaps = 12/630 (1%)
 Strand = Plus / Minus

                                                                         
Query: 348   ttatgagcaggaatttgcagatcgtcatcaaaagtgaactggaagtcaaaattattaaca 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14854 ttatgagcaggaatttgcagatcgtcatcaaaagtgaactggaagtcaaaattattaaca 14795

                                                                         
Query: 408   atatcatcattcattaacgatgaaaggtgcgaggcaaacggttgcttgacatcaactgcc 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14794 atatcatcattcattaacgatgaaaggtgcgaggcaaacggttgcttgacatcaactgcc 14735

                                                                         
Query: 468   ttagatatatcgtattttagtaaaatgttacgaatggaatcagtcaaggcaccataaatg 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14734 ttagatatatcgtattttagtaaaatgttacgaatggaatcagtcaaggcaccataaatg 14675

                                                                         
Query: 528   catctagcaccttcgtatctatctctatcgcaaacagaacctcttcgtagtaacaaattt 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14674 catctagcaccttcgtatctatctctatcgcaaacagaacctcttcgtagtaacaaattt 14615

                                                                         
Query: 588   acaacatcttcatgaccacataagctggctaaaaataatggcgaattgtcaaactcatct 647
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14614 acaacatcttcatgaccacataagctggctaaaaataatggcgaattgtcaaactcatct 14555

                                                                         
Query: 648   acaccgttgacattaactccagtagaaattaatcgatctgcattctcaacatcgcctatc 707
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14554 acaccgttgacattaactccagtagaaattaatcgatctgcattctcaacatcgcctatc 14495

                                                                         
Query: 708   ctacaagcaaaacacaactccaagaaattcttattctgatttagcagtggatttttagca 767
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14494 ctacaagcaaaacacaactccaagaaattcttattctgatttagcagtggatttttagca 14435

                                                                         
Query: 768   ctagtatcaaccattaccaaccccaaacggacccctttcaccaagcaactttttatgttt 827
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 14434 ctagtatcaaccattaccaaccccaaacgga-ccctttcaccaagcaactttttatg-tt 14377

                                                                         
Query: 828   aaaaactgaatttgatncctgaaatcaaatggtcccttaaatgcgagcccaaatgtctat 887
             |||||||||| ||||| |||| ||||||||||||||| || |||||||||||||||||| 
Sbjct: 14376 aaaaactgaa-ttgattcctg-aatcaaatggtccctaaattgcgagcccaaatgtcta- 14320

                                                                         
Query: 888   tcggactttctggaaaaatcgacaattttcttaattaattatggaagcctttttncatct 947
             ||||||||||| |||| |||||| |||||||| | ||||||||||   |||||| |||||
Sbjct: 14319 tcggactttct-gaaagatcgac-attttctt-agtaattatgga--gcttttttcatct 14265

                                           
Query: 948   tttatttggatggcaagtgcaatcgatttt 977
             |||| || |||||||||| |||||||||||
Sbjct: 14264 tttaatt-gatggcaagt-caatcgatttt 14237


>3x_Contig790 
          Length = 4570

 Score =  349 bits (176), Expect = 7e-96
 Identities = 267/296 (90%), Gaps = 1/296 (0%)
 Strand = Plus / Minus

                                                                       
Query: 86  ccctctctgatgggtcagatacgtgcatggttttatcaaggtacgataggagatccggaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ccctctctgatgggtcagatacgtgcatggttttatcaaggtacgataggagatccggaa 248

                                                                       
Query: 146 atcccgacttcatagataggaggtttttatgttttaattggtcttgctttaattcatgta 205
           ||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||
Sbjct: 247 atcccgacttcatagataggaggtggatatgttttacttggtcttgctttaattcatgta 188

                                                                       
Query: 206 agacaggt-ccaataaaatgaacttcaatattgaacggaacgcctctatatctgatccgg 264
           |||||||| | ||  |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 187 agacaggtactaaataaatgaacttcaatattgaacggaacgcctctatatctgacccgg 128

                                                                       
Query: 265 taggcattctcttggatttcaatgttgcccatggaccactgaatttctgcctgaaataac 324
           |||||||||||||| ||||||||||| |||||| |||||| ||||||| ||| |  ||||
Sbjct: 127 taggcattctcttgtatttcaatgtttcccatgtaccacttaatttcttccttatttaac 68

                                                                   
Query: 325 ttgatcgtgccgccagtataaacttatgagcaggaatttgcagatcgtcatcaaaa 380
           || ||| | || ||| ||||||||||| | ||  ||||| || ||| |||||||||
Sbjct: 67  tttatctttcctccattataaacttattatcattaattttcatatcttcatcaaaa 12


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6439
Number of Sequences: 1807
Number of extensions: 6439
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 2
length of query: 981
length of database: 10,358,551
effective HSP length: 16
effective length of query: 965
effective length of database: 10,329,639
effective search space: 9968101635
effective search space used: 9968101635
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)