BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZB12FM1.SCF screened BAC_end (981 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1637 1009 0.0 3x_Contig790 349 7e-96 >3x_Contig1637 Length = 14855 Score = 1009 bits (509), Expect = 0.0 Identities = 610/630 (96%), Gaps = 12/630 (1%) Strand = Plus / Minus Query: 348 ttatgagcaggaatttgcagatcgtcatcaaaagtgaactggaagtcaaaattattaaca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14854 ttatgagcaggaatttgcagatcgtcatcaaaagtgaactggaagtcaaaattattaaca 14795 Query: 408 atatcatcattcattaacgatgaaaggtgcgaggcaaacggttgcttgacatcaactgcc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14794 atatcatcattcattaacgatgaaaggtgcgaggcaaacggttgcttgacatcaactgcc 14735 Query: 468 ttagatatatcgtattttagtaaaatgttacgaatggaatcagtcaaggcaccataaatg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14734 ttagatatatcgtattttagtaaaatgttacgaatggaatcagtcaaggcaccataaatg 14675 Query: 528 catctagcaccttcgtatctatctctatcgcaaacagaacctcttcgtagtaacaaattt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14674 catctagcaccttcgtatctatctctatcgcaaacagaacctcttcgtagtaacaaattt 14615 Query: 588 acaacatcttcatgaccacataagctggctaaaaataatggcgaattgtcaaactcatct 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14614 acaacatcttcatgaccacataagctggctaaaaataatggcgaattgtcaaactcatct 14555 Query: 648 acaccgttgacattaactccagtagaaattaatcgatctgcattctcaacatcgcctatc 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14554 acaccgttgacattaactccagtagaaattaatcgatctgcattctcaacatcgcctatc 14495 Query: 708 ctacaagcaaaacacaactccaagaaattcttattctgatttagcagtggatttttagca 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14494 ctacaagcaaaacacaactccaagaaattcttattctgatttagcagtggatttttagca 14435 Query: 768 ctagtatcaaccattaccaaccccaaacggacccctttcaccaagcaactttttatgttt 827 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 14434 ctagtatcaaccattaccaaccccaaacgga-ccctttcaccaagcaactttttatg-tt 14377 Query: 828 aaaaactgaatttgatncctgaaatcaaatggtcccttaaatgcgagcccaaatgtctat 887 |||||||||| ||||| |||| ||||||||||||||| || |||||||||||||||||| Sbjct: 14376 aaaaactgaa-ttgattcctg-aatcaaatggtccctaaattgcgagcccaaatgtcta- 14320 Query: 888 tcggactttctggaaaaatcgacaattttcttaattaattatggaagcctttttncatct 947 ||||||||||| |||| |||||| |||||||| | |||||||||| |||||| ||||| Sbjct: 14319 tcggactttct-gaaagatcgac-attttctt-agtaattatgga--gcttttttcatct 14265 Query: 948 tttatttggatggcaagtgcaatcgatttt 977 |||| || |||||||||| ||||||||||| Sbjct: 14264 tttaatt-gatggcaagt-caatcgatttt 14237 >3x_Contig790 Length = 4570 Score = 349 bits (176), Expect = 7e-96 Identities = 267/296 (90%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 86 ccctctctgatgggtcagatacgtgcatggttttatcaaggtacgataggagatccggaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 ccctctctgatgggtcagatacgtgcatggttttatcaaggtacgataggagatccggaa 248 Query: 146 atcccgacttcatagataggaggtttttatgttttaattggtcttgctttaattcatgta 205 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 247 atcccgacttcatagataggaggtggatatgttttacttggtcttgctttaattcatgta 188 Query: 206 agacaggt-ccaataaaatgaacttcaatattgaacggaacgcctctatatctgatccgg 264 |||||||| | || |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 187 agacaggtactaaataaatgaacttcaatattgaacggaacgcctctatatctgacccgg 128 Query: 265 taggcattctcttggatttcaatgttgcccatggaccactgaatttctgcctgaaataac 324 |||||||||||||| ||||||||||| |||||| |||||| ||||||| ||| | |||| Sbjct: 127 taggcattctcttgtatttcaatgtttcccatgtaccacttaatttcttccttatttaac 68 Query: 325 ttgatcgtgccgccagtataaacttatgagcaggaatttgcagatcgtcatcaaaa 380 || ||| | || ||| ||||||||||| | || ||||| || ||| ||||||||| Sbjct: 67 tttatctttcctccattataaacttattatcattaattttcatatcttcatcaaaa 12 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6439 Number of Sequences: 1807 Number of extensions: 6439 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 2 length of query: 981 length of database: 10,358,551 effective HSP length: 16 effective length of query: 965 effective length of database: 10,329,639 effective search space: 9968101635 effective search space used: 9968101635 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)