BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZC03RM1.SCF screened BAC_end (900 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1791 920 0.0 >3x_Contig1791 Length = 39945 Score = 920 bits (464), Expect = 0.0 Identities = 509/524 (97%) Strand = Plus / Minus Query: 47 cgttctctagtaattcagatttttcggctactttagtactaatgaccccaacttggtctt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28181 cgttctctagtaattcagatttttcggctactttagtactaatgaccccaacttggtctt 28122 Query: 107 ctgtaccctctggttcatctggatgatgaagttcttcgtcactattcaacgattctttca 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28121 ctgtaccctctggttcatctggatgatgaagttcttcgtcactattcaacgattctttca 28062 Query: 167 cagtgactacttgctctttataccatcttccgatctttttcatacctgtttgcaagtacc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28061 cagtgactacttgctctttataccatcttccgatctttttcatacctgtttgcaagtacc 28002 Query: 227 ttttggttgcgtttgagtttgttgaatcaactgaagacctagatcttatagatacatttg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28001 ttttggttgcgtttgagtttgttgaatcaactgaagacctagatcttatagatacatttg 27942 Query: 287 aatcatcgttacttttatttttcaggaatgatcgagtactatccgtagacgtttgtggct 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27941 aatcatcgttacttttatttttcaggaatgatcgagtactatccgtagacgtttgtggct 27882 Query: 347 gatctgtgttgtacgattcgttaatggtgctttcactttcttcgacggttggtgagtcaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27881 gatctgtgttgtacgattcgttaatggtgctttcactttcttcgacggttggtgagtcaa 27822 Query: 407 cagcagagttagtcgactgccgttcggctaagttggtgttcgatatgtcattgttctcgc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27821 cagcagagttagtcgactgccgttcggctaagttggtgttcgatatgtcattgttctcgc 27762 Query: 467 gaacagaagaccctggggtaaattggcggtcacttttgaaaaattcaaagtcctcgggat 526 ||||||||||||||| | ||||||| || |||||||||| | |||||||||| |||| || Sbjct: 27761 gaacagaagaccctgtgttaaattgtcgctcacttttgatatattcaaagtcttcggtat 27702 Query: 527 aactcggatcccttttttgtttgggggattcccaaatacctcct 570 |||| | |||| |||||||||| | |||||||| ||||||||| Sbjct: 27701 aacttgtatcctttttttgtttcgttgattcccagatacctcct 27658 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6501 Number of Sequences: 1807 Number of extensions: 6501 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 900 length of database: 10,358,551 effective HSP length: 16 effective length of query: 884 effective length of database: 10,329,639 effective search space: 9131400876 effective search space used: 9131400876 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)