BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZC11RM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1682 950 0.0 >3x_Contig1682 Length = 16889 Score = 950 bits (479), Expect = 0.0 Identities = 500/507 (98%) Strand = Plus / Plus Query: 47 taagacacaacacccatttctttattgaattcttcgctatggatcttttgacccataacg 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14798 taagacacaacacccatttctttattgaattcttcgctatggatcttttgacccataacg 14857 Query: 107 gtgaagtcgttggtgttatggcttacaaccaagaagacggtaccatccacagattccgtg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14858 gtgaagtcgttggtgttatggcttacaaccaagaagacggtaccatccacagattccgtg 14917 Query: 167 ctcacaagaccattatcgctactggtgggtacggtcgtgcctacttctcttgtacatctg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14918 ctcacaagaccattatcgctactggtgggtacggtcgtgcctacttctcttgtacatctg 14977 Query: 227 ctcatacttgtacaggtgatggttatgctatggtttctcgtgctggtttcccattgcaag 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14978 ctcatacttgtacaggtgatggttatgctatggtttctcgtgctggtttcccattgcaag 15037 Query: 287 atttggaatttattcaattccatccttccggtatctacggttccggttgtttgatcactg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15038 atttggaatttattcaattccatccttccggtatctacggttccggttgtttgatcactg 15097 Query: 347 aaggtgctcgtggtgagggtggtttcttggttaactctgaaggtgaacgtttcatggaac 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15098 aaggtgctcgtggtgagggtggtttcttggttaactctgaaggtgaacgtttcatggaac 15157 Query: 407 gttatgctccaactgctaaggatttagcttgtagagacgttgtttctcgtgccatcacca 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15158 gttatgctccaactgctaaggatttagcttgtagagacgttgtttctcgtgccatcacca 15217 Query: 467 tggaaatcagagaaagtagaagtgttggttcagaataggatcacatgttcttgcaattga 526 |||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||| Sbjct: 15218 tggaaatcagagaaggtagaggtgttggtccagaaaaggatcacatgttcttgcaattga 15277 Query: 527 accattttgcaccttttgtgcttcatg 553 ||||||| |||||| ||||||||||| Sbjct: 15278 accatttgccaccttctgtgcttcatg 15304 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6205 Number of Sequences: 1807 Number of extensions: 6205 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)