BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZD02FM1.SCF screened BAC_end (901 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1560 1560 0.0 3x_Contig32 718 0.0 >3x_Contig1560 Length = 9209 Score = 1560 bits (787), Expect = 0.0 Identities = 807/815 (99%) Strand = Plus / Minus Query: 86 aacattaaaatgaactgaaaaagaagagaagcaattgaattgttttaaattatcaggatc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4182 aacattaaaatgaactgaaaaagaagagaagcaattgaattgttttaaattatcaggatc 4123 Query: 146 gtgatgcttttttacattacatctaggtttgagtatttggtggcacttatcttgtttgca 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4122 gtgatgcttttttacattacatctaggtttgagtatttggtggcacttatcttgtttgca 4063 Query: 206 gtgacacttttatttaatggtatttacacggtatcctgtccagccacgaacaaaaatgta 265 |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4062 gtgacactttaaaataatggtatttacacggtatcctgtccagccacgaacaaaaatgta 4003 Query: 266 accggtaccttcccttataagttctagaagtctttcgcggatgtttttgcactcctctat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4002 accggtaccttcccttataagttctagaagtctttcgcggatgtttttgcactcctctat 3943 Query: 326 caattgttcatttttcaaagtgatgacgtgcatttgtttttcggattcaatctttgtttg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3942 caattgttcatttttcaaagtgatgacgtgcatttgtttttcggattcaatctttgtttg 3883 Query: 386 attattactttgatattttctatctaaaaaactgattgtcttggtgtcaattttacaatt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3882 attattactttgatattttctatctaaaaaactgattgtcttggtgtcaattttacaatt 3823 Query: 446 tttgtcaccgtcaataaaaatattatctgaatacgaagtcgaagagtcaactgctggctt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3822 tttgtcaccgtcaataaaaatattatctgaatacgaagtcgaagagtcaactgctggctt 3763 Query: 506 acctctagtagtataggcatcaaaattgaaatcaaatacttgctcatattctccgacacc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3762 acctctagtagtataggcatcaaaattgaaatcaaatacttgctcatattctccgacacc 3703 Query: 566 tttgcttgtaaccaaccaatgctcaaaatttttaaaatctgaatcattaaggacaagtga 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3702 tttgcttgtaaccaaccaatgctcaaaatttttaaaatctgaatcattaaggacaagtga 3643 Query: 626 cgctctcttgatttcatttaattttcttcttttctcttctcttaattntctttttctagt 685 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 3642 cgctctcttgatttcatttaattttcttcttttctcttctcttaattttctttttctagt 3583 Query: 686 ttcggattcataagagccacttggatgaataacccaccttgttacatccacttgtgccat 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3582 ttcggattcataagagccacttggatgaataacccaccttgttacatccacttgtgccat 3523 Query: 746 ttttatgatttttctttgattntgggttagtaaaatgattaatattgttctaaaccattt 805 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3522 ttttatgatttttctttgattttgggttagtaaaatgattaatattgttctaaaccattt 3463 Query: 806 caatacttancaattccataaattaatcgatgatttaattttatggtgctgttgaatatt 865 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3462 caatacttacaaattccataaattaatcgatgatttaattttatggtgctgttgaatatt 3403 Query: 866 ggattgggctgatgtcgntaatttcattcttcaat 900 ||||||||||||||||| ||||||||||||||||| Sbjct: 3402 ggattgggctgatgtcgttaatttcattcttcaat 3368 >3x_Contig32 Length = 894 Score = 718 bits (362), Expect = 0.0 Identities = 388/394 (98%), Gaps = 2/394 (0%) Strand = Plus / Minus Query: 238 atcctgtccagccacgaacaaaaatgtaaccggtaccttcc-cttataagttctagaagt 296 ||||| |||| |||| ||||||||| |||||| |||||||| |||||||||||||||||| Sbjct: 393 atcctttccatccactaacaaaaatttaaccg-taccttccgcttataagttctagaagt 335 Query: 297 ctttcgcggatgtttttgcactcctctatcaattgttcatttttcaaagtgatgacgtgc 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ctttcgcggatgtttttgcactcctctatcaattgttcatttttcaaagtgatgacgtgc 275 Query: 357 atttgtttttcggattcaatctttgtttgattattactttgatattttctatctaaaaaa 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 atttgtttttcggattcaatctttgtttgattattactttgatattttctatctaaaaaa 215 Query: 417 ctgattgtcttggtgtcaattttacaatttttgtcaccgtcaataaaaatattatctgaa 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 ctgattgtcttggtgtcaattttacaatttttgtcaccgtcaataaaaatattatctgaa 155 Query: 477 tacgaagtcgaagagtcaactgctggcttacctctagtagtataggcatcaaaattgaaa 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 tacgaagtcgaagagtcaactgctggcttacctctagtagtataggcatcaaaattgaaa 95 Query: 537 tcaaatacttgctcatattctccgacacctttgcttgtaaccaaccaatgctcaaaattt 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 tcaaatacttgctcatattctccgacacctttgcttgtaaccaaccaatgctcaaaattt 35 Query: 597 ttaaaatctgaatcattaaggacaagtgacgctc 630 |||||||||||||||||||||||||||||||||| Sbjct: 34 ttaaaatctgaatcattaaggacaagtgacgctc 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8732 Number of Sequences: 1807 Number of extensions: 8732 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 2 length of query: 901 length of database: 10,358,551 effective HSP length: 16 effective length of query: 885 effective length of database: 10,329,639 effective search space: 9141730515 effective search space used: 9141730515 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)