BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZE02FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1486 1600 0.0 >3x_Contig1486 Length = 12131 Score = 1600 bits (807), Expect = 0.0 Identities = 836/846 (98%), Gaps = 1/846 (0%) Strand = Plus / Plus Query: 89 gtctgatgatgatatcgacgctaccttagacgtcgcacagacgtgttttggcgaattaag 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9381 gtctgatgatgatatcgacgctaccttagacgtcgcacagacgtgttttggcgaattaag 9440 Query: 149 tcatctgcttgcattaccatcgaaatgtcaaattatccgcaaaaaaagagcagttggatt 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9441 tcatctgcttgcattaccatcgaaatgtcaaattatccgcaaaaaaagagcagttggatt 9500 Query: 209 tgtccctggtttcatcttcgatgatgaactagaggttaacgttaagatcaaaatcccaag 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9501 tgtccctggtttcatcttcgatgatgaactagaggttaacgttaagatcaaaatcccaag 9560 Query: 269 agaagcgttggaggaaatggttcttgttgtacaaaagaaactagaatcatatccacccgc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9561 agaagcgttggaggaaatggttcttgttgtacaaaagaaactagaatcatatccacccgc 9620 Query: 329 acaaaatatacaatttagttgctttgatggtggcagcgatgtttggtgtgatattggtgg 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9621 acaaaatatacaatttagttgctttgatggtggcagcgatgtttggtgtgatattggtgg 9680 Query: 389 taaagacctgggtgtgtctatcttacagaatttttaccaaacagactctccgatcacagc 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9681 taaagacctgggtgtgtctatcttacagaatttttaccaaacagactctccgatcacagc 9740 Query: 449 ggcgcaaacgttacacattggtgaccaattcgctcccaaaggttccgcaaacgatttcaa 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9741 ggcgcaaacgttacacattggtgaccaattcgctcccaaaggttccgcaaacgatttcaa 9800 Query: 509 agctcgtagtgctggctgcacattgtggatctcatctcctcgtgagacaatcgaggtatt 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9801 agctcgtagtgctggctgcacattgtggatctcatctcctcgtgagacaatcgaggtatt 9860 Query: 569 agatgatctcttaccatatctatagagaaacagccaagagctgggtatcatattgtcacg 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9861 agatgatctcttaccatatctatagagaaacagccaagagctgggtatcatattgtcacg 9920 Query: 629 tttaatttcgaatcacgtgtatcatttatttataatagcgccagtataagtaaaaaacca 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9921 tttaatttcgaatcacgtgtatcatttatttataatagcgccagtataagtaaaaaacca 9980 Query: 689 gaattgtgtagtatccgggtaagcaccggacgaaacccccagttcaactttttcaaaagg 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9981 gaattgtgtagtatccgggtaagcaccggacgaaacccccagttcaactttttcaaaagg 10040 Query: 749 acctttcttaaaggatttcatcccttgcacaaagcgatgaggcaacagagatgcctgata 808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10041 acctttcttaaaggatttcatcccttgcacaaagcgatgaggcaacagagatgcctgata 10100 Query: 809 taacgcttncaaaaacagtgattatcgatnatagagcaaactttacttacttnncatcat 868 |||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 10101 taacgcttccaaaaacagtgattatcgataatagagcaaactttacttacttccaatcat 10160 Query: 869 taatttgagcanattcattaatacttcaagttaa-gggtttacgagggtttctggaaata 927 ||||||||||| ||||||||||||||||||| || ||||||||||||||||||| ||||| Sbjct: 10161 taatttgagcaaattcattaatacttcaagtaaaggggtttacgagggtttctgaaaata 10220 Query: 928 tttaaa 933 ||||| Sbjct: 10221 gttaaa 10226 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5870 Number of Sequences: 1807 Number of extensions: 5870 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)