BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC10ZE02FM1.SCF screened BAC_end
         (937 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1486                                                        1600   0.0  

>3x_Contig1486 
          Length = 12131

 Score = 1600 bits (807), Expect = 0.0
 Identities = 836/846 (98%), Gaps = 1/846 (0%)
 Strand = Plus / Plus

                                                                         
Query: 89    gtctgatgatgatatcgacgctaccttagacgtcgcacagacgtgttttggcgaattaag 148
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9381  gtctgatgatgatatcgacgctaccttagacgtcgcacagacgtgttttggcgaattaag 9440

                                                                         
Query: 149   tcatctgcttgcattaccatcgaaatgtcaaattatccgcaaaaaaagagcagttggatt 208
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9441  tcatctgcttgcattaccatcgaaatgtcaaattatccgcaaaaaaagagcagttggatt 9500

                                                                         
Query: 209   tgtccctggtttcatcttcgatgatgaactagaggttaacgttaagatcaaaatcccaag 268
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9501  tgtccctggtttcatcttcgatgatgaactagaggttaacgttaagatcaaaatcccaag 9560

                                                                         
Query: 269   agaagcgttggaggaaatggttcttgttgtacaaaagaaactagaatcatatccacccgc 328
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9561  agaagcgttggaggaaatggttcttgttgtacaaaagaaactagaatcatatccacccgc 9620

                                                                         
Query: 329   acaaaatatacaatttagttgctttgatggtggcagcgatgtttggtgtgatattggtgg 388
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9621  acaaaatatacaatttagttgctttgatggtggcagcgatgtttggtgtgatattggtgg 9680

                                                                         
Query: 389   taaagacctgggtgtgtctatcttacagaatttttaccaaacagactctccgatcacagc 448
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9681  taaagacctgggtgtgtctatcttacagaatttttaccaaacagactctccgatcacagc 9740

                                                                         
Query: 449   ggcgcaaacgttacacattggtgaccaattcgctcccaaaggttccgcaaacgatttcaa 508
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9741  ggcgcaaacgttacacattggtgaccaattcgctcccaaaggttccgcaaacgatttcaa 9800

                                                                         
Query: 509   agctcgtagtgctggctgcacattgtggatctcatctcctcgtgagacaatcgaggtatt 568
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9801  agctcgtagtgctggctgcacattgtggatctcatctcctcgtgagacaatcgaggtatt 9860

                                                                         
Query: 569   agatgatctcttaccatatctatagagaaacagccaagagctgggtatcatattgtcacg 628
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9861  agatgatctcttaccatatctatagagaaacagccaagagctgggtatcatattgtcacg 9920

                                                                         
Query: 629   tttaatttcgaatcacgtgtatcatttatttataatagcgccagtataagtaaaaaacca 688
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9921  tttaatttcgaatcacgtgtatcatttatttataatagcgccagtataagtaaaaaacca 9980

                                                                         
Query: 689   gaattgtgtagtatccgggtaagcaccggacgaaacccccagttcaactttttcaaaagg 748
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9981  gaattgtgtagtatccgggtaagcaccggacgaaacccccagttcaactttttcaaaagg 10040

                                                                         
Query: 749   acctttcttaaaggatttcatcccttgcacaaagcgatgaggcaacagagatgcctgata 808
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10041 acctttcttaaaggatttcatcccttgcacaaagcgatgaggcaacagagatgcctgata 10100

                                                                         
Query: 809   taacgcttncaaaaacagtgattatcgatnatagagcaaactttacttacttnncatcat 868
             |||||||| |||||||||||||||||||| ||||||||||||||||||||||   |||||
Sbjct: 10101 taacgcttccaaaaacagtgattatcgataatagagcaaactttacttacttccaatcat 10160

                                                                         
Query: 869   taatttgagcanattcattaatacttcaagttaa-gggtttacgagggtttctggaaata 927
             ||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||
Sbjct: 10161 taatttgagcaaattcattaatacttcaagtaaaggggtttacgagggtttctgaaaata 10220

                   
Query: 928   tttaaa 933
              |||||
Sbjct: 10221 gttaaa 10226


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5870
Number of Sequences: 1807
Number of extensions: 5870
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)