BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZE03RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig681 1273 0.0 >3x_Contig681 Length = 3369 Score = 1273 bits (642), Expect = 0.0 Identities = 712/731 (97%), Gaps = 4/731 (0%) Strand = Plus / Minus Query: 48 aagtaaagtgtcatcatcagacttgacacttttggctaaaaattcaaaacacttcgaact 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1890 aagtaaagtgtcatcatcagacttgacacttttggctaaaaattcaaaacacttcgaact 1831 Query: 108 ttcatttgtgcatgtcttcgaaatagaaggtaagctggcatctctcaatgtgcatatcgt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1830 ttcatttgtgcatgtcttcgaaatagaaggtaagctggcatctctcaatgtgcatatcgt 1771 Query: 168 tctaaaaacgtttagacccaaaaactgtacatgaggttcagacatgaggataacgcgcct 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1770 tctaaaaacgtttagacccaaaaactgtacatgaggttcagacatgaggataacgcgcct 1711 Query: 228 gatgaatgtgagaatattagctaatacttcattgctcaacgtcgtttccttatgtctttc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1710 gatgaatgtgagaatattagctaatacttcattgctcaacgtcgtttccttatgtctttc 1651 Query: 288 aatgaaaagtacctcttgataatatagcatagcatgcaatagttgctctatcatatcatg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1650 aatgaaaagtacctcttgataatatagcatagcatgcaatagttgctctatcatatcatg 1591 Query: 348 ttctatattgctgtctttacgaattccgttcgcaacaatccagttatatatctcttcttg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1590 ttctatattgctgtctttacgaattccgttcgcaacaatccagttatatatctcttcttg 1531 Query: 408 tactgaattgagatttcgaaagatgtccgtctggaaggaagactcaaaatccgatttgga 467 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1530 tactgaattgagatttcgaaggatgtccgtctggaaggaagactcaaaatccgatttgga 1471 Query: 468 aatcaattctctggctttgagaattactaaattggtattaatganggcctcccaggatgc 527 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1470 aatcaattctctggctttgagaattactaaattggtattaatgagggcctcccaggatgc 1411 Query: 528 atcatggactttncaagaagccgatgaaatgcttacaaagtgtagaatattttctacaaa 587 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1410 atcatggactttccaagaagccgatgaaatgcttacaaggtgtagaatattttctacaaa 1351 Query: 588 cactagttttgaagtgttccttttncacagtgaaagacaaagcagataggctttttagta 647 ||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1350 cactagttttg-agtggtccttttccacagtgaaagacaaagcagatagtctttttagta 1292 Query: 648 ttctaagcactattaaaaatacaagccccattttttggcatatttgagaacttttcggcc 707 ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1291 ttctaggcactattaaaaatacgagccccattttttggcatatttgagaacttttcggcc 1232 Query: 708 tc-tactattttc-ctgtgactaacattttaatttaggagagttttgaatgatttcggga 765 || |||||||||| |||| ||||||| | ||| ||||||||||||||||||| ||| ||| Sbjct: 1231 tcttactattttcgctgtaactaacaatataacttaggagagttttgaatga-ttctgga 1173 Query: 766 tcggaagtttt 776 ||| ||||||| Sbjct: 1172 tcgtaagtttt 1162 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7543 Number of Sequences: 1807 Number of extensions: 7543 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)