BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZE04RM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1660 1233 0.0 >3x_Contig1660 Length = 13166 Score = 1233 bits (622), Expect = 0.0 Identities = 673/685 (98%), Gaps = 4/685 (0%) Strand = Plus / Plus Query: 48 atgtttattcatagttttcccaagtgctaatgtaaaactaactggatatttgggaaatgg 107 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 5781 atgtttattcatagttt-cccaagtgctaatgtaaaactaactggatatttgggaaatgg 5839 Query: 108 aagatggtcagttccagaaacaaacgaaacgagacgacaactttatgtacttcagcaacc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5840 aagatggtcagttccagaaacaaacgaaacgagacgacaactttatgtacttcagcaacc 5899 Query: 168 aactcttcctcctcccagggtaccccccaaatgtccgaaaggtatgctatgggaagagta 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5900 aactcttcctcctcccagggtaccccccaaatgtccgaaaggtatgctatgggaagagta 5959 Query: 228 ttatttactcaataaagagaaatacattcgtgaagttatgagaaattgaaggcttttcag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5960 ttatttactcaataaagagaaatacattcgtgaagttatgagaaattgaaggcttttcag 6019 Query: 288 ctgatgccatgttattaatgtgttatgatacaaaatattaaaggaaaactcaatatataa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6020 ctgatgccatgttattaatgtgttatgatacaaaatattaaaggaaaactcaatatataa 6079 Query: 348 tggaagtaaattaaatgttaacagacagtgtctataataaatgctattttatgcgaataa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6080 tggaagtaaattaaatgttaacagacagtgtctataataaatgctattttatgcgaataa 6139 Query: 408 agatctaatgctttatttatgttttattggtccttcgataaaggctgattttcctctcag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6140 agatctaatgctttatttatgttttattggtccttcgataaaggctgattttcctctcag 6199 Query: 468 tgtgacttagaattctgcttcatcaggatactcatcatcacctcccaggtcatcatcccc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6200 tgtgacttagaattctgcttcatcaggatactcatcatcacctcccaggtcatcatcccc 6259 Query: 528 atcatcgaagtacttttcagcattgtagtcatcatcgtcgtcctcttcaaattcgtcgtc 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6260 atcatcgaagtacttttcagcattgtagtcatcatcgtcgtcctcttcaaattcgtcgtc 6319 Query: 588 ttcatcgatatcatctttattcgcttccttctcctcatttccttncttcgttttcctcat 647 |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 6320 ttcatcgatatcatctttatcggcttccttctcctcatttcctt-cttcgttttcctcat 6378 Query: 648 catcatcgaacataccgttcatcttttccaaaagagcacgaactaccgntttcatcttct 707 ||||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||| Sbjct: 6379 catcatcgaccataccgctcatcttttccaaaagagcacgacctaccgc-ttcatcttc- 6436 Query: 708 ttctttagacccattcaattcaaag 732 ||| ||||||||||||||| ||||| Sbjct: 6437 ttccttagacccattcaatccaaag 6461 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9599 Number of Sequences: 1807 Number of extensions: 9599 Number of successful extensions: 102 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)