BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZE07FM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1535 1314 0.0 >3x_Contig1535 Length = 11102 Score = 1314 bits (663), Expect = 0.0 Identities = 729/743 (98%), Gaps = 6/743 (0%) Strand = Plus / Plus Query: 87 ttgccggattgctttggtcaaaacaattctatcatttcgtgcaagacgaatggtactgcg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4009 ttgccggattgctttggtcaaaacaattctatcatttcgtgcaagacgaatggtactgcg 4068 Query: 147 gtgatccactgcaaaagccttctccaccaaagaaccgtgcaaatgggagaaacaaggatt 206 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4069 gtgatccactgcaaaagcctcctccaccaaagaaccgtgcaaatgggagaaacaaggatt 4128 Query: 207 ggaaacatatgtatgctgaagatatattatccttgccagataagtgggaatatccattct 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4129 ggaaacatatgtatgctgaagatatattatccttgccagataagtgggaatatccattct 4188 Query: 267 ttgcttcttgggacaccgcgtttcattgtatcccattagctatgatagaccctgaatttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4189 ttgcttcttgggacaccgcgtttcattgtatcccattagctatgatagaccctgaatttg 4248 Query: 327 caaagaaacaattggatatttttacgagagaatggtacatgcatcctaacggacaaattc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4249 caaagaaacaattggatatttttacgagagaatggtacatgcatcctaacggacaaattc 4308 Query: 387 ctgcttatgaatggaattttagtgatgtaaatcctccagttcatgcatgggctgtgtacc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4309 ctgcttatgaatggaattttagtgatgtaaatcctccagttcatgcatgggctgtgtacc 4368 Query: 447 gtgttttcaagattgaaagaaatatgtatggccgtgaggatagagtgttcttggaaagag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4369 gtgttttcaagattgaaagaaatatgtatggccgtgaggatagagtgttcttggaaagag 4428 Query: 507 tattccaaaaacttttgttgaacttcacatggtgggttaaccgcaaagatcatgacggta 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4429 tattccaaaaacttttgttgaacttcacatggtgggttaaccgcaaagatcatgacggta 4488 Query: 567 acaacgtctttgaaggtggatttttaggattggataatattggtatcttcaatagatcag 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4489 acaacgtctttgaaggtggatttttaggattggataatattggtatcttcaatagatcag 4548 Query: 627 aacctttgccaacaggtggaacattggaacaggcagactcgactggttggatggcattct 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4549 aacctttgccaacaggtggaacattggaacaggcagactcgactggttggatggcattct 4608 Query: 687 tctcattgcaaatgttaaatatcgcattataaacttgc-aaggaaaattctgtctatgaa 745 ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| Sbjct: 4609 tctcattgcaaatgttaaatatcgcatta-gaacttgcaaaggaaaatcctgtctatgaa 4667 Query: 746 gacattggcactaagtttttccgaacactttttgttacattagtgaattttatgttcctt 805 ||||||| |||||||||||| ||||||||||||| ||||| |||| ||| |||| ||||| Sbjct: 4668 gacattgccactaagttttt-cgaacactttttg-tacatcagtg-attctatg-tcctt 4723 Query: 806 caaattcgaaaagataagtgcag 828 |||||||||||||| ||||||| Sbjct: 4724 caaattcgaaaagaatagtgcag 4746 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7170 Number of Sequences: 1807 Number of extensions: 7170 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)