BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZE08RM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1765 1033 0.0 3x_Contig1482 168 1e-41 3x_Contig1769 167 5e-41 3x_Contig1658 161 3e-39 3x_Contig340 157 5e-38 >3x_Contig1765 Length = 24733 Score = 1033 bits (521), Expect = 0.0 Identities = 658/695 (94%), Gaps = 7/695 (1%) Strand = Plus / Minus Query: 44 attagtttttttttt-aatatgaggaagaaacattccttcacatcgagcagcaatggaag 102 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17190 attagttttttttttcaatatgaggaagaaacattccttcacatcgagcagcaatggaag 17131 Query: 103 ggatagataactattgtttcagcccgttt-acaacctctcctttcctgcgatttaccgcg 161 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 17130 ggatagataactattgtttcagcccgtttcacaacctctcctttcctgcgatttaccgcg 17071 Query: 162 ttattggaagatatgtttggaagttccccagagtgatttacttactaatatgaaccactg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17070 ttattggaagatatgtttggaagttccccagagtgatttacttactaatatgaaccactg 17011 Query: 222 tccaagtacttgtcacacggagcatatatgtagtcgcatgattatcattacgttactgta 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17010 tccaagtacttgtcacacggagcatatatgtagtcgcatgattatcattacgttactgta 16951 Query: 282 ccccaaacttagtacaacagacatcaacaaatactaggcatcggtggtttagtggtaaaa 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16950 ccccaaacttagtacaacagacatcaacaaatactaggcatcggtggtttagtggtaaaa 16891 Query: 342 tccaacgttgccatcgttgggccccgggttcgattcccggccgatgcattctttttcatt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16890 tccaacgttgccatcgttgggccccgggttcgattcccggccgatgcattctttttcatt 16831 Query: 402 attcaataatttattgagcactcaatttttttatcaagcgttgctacctatttcataaac 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16830 attcaataatttattgagcactcaatttttttatcaagcgttgctacctatttcataaac 16771 Query: 462 tgaatccactatagcatttcgattcattc-atgcanattcaatagtatcggttaggtttc 520 ||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||| Sbjct: 16770 tgaatccactatagcatttcgattcattcaatgcaaattcaatagtatcggtaaggtttc 16711 Query: 521 actaaacgctctcgatgggtttcttacttcgtttcttttattggacanaaaaaccatctt 580 ||||| |||||||||| |||||||||| |||||||||||| ||| |||| ||||||| Sbjct: 16710 actaacggctctcgatgtgtttcttactcgttttcttttattgtacagaaaacccatctt 16651 Query: 581 ttc-atttttaacctgaatccaacatttgaaaatgcgaagtgccaattccattgaaataa 639 | | ||| | | | |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 16650 tacaattctcagcatgaatccaacatttgaaaatcgaaagtgccaattcaattgaaataa 16591 Query: 640 gttaaaaggatgatgagaagtttccagtttatttttgcgaaaaat-gttgattgatttca 698 ||||||| |||||||||||||| | ||| || ||||||||| ||| || ||| ||| ||| Sbjct: 16590 gttaaaatgatgatgagaagttacaagtata-ttttgcgaagaatagtagatagatatca 16532 Query: 699 ttgaacagggtagttcaattaccttgcctttgata 733 ||||||| |||||||||| || ||||||||||||| Sbjct: 16531 ttgaacaaggtagttcaa-taacttgcctttgata 16498 >3x_Contig1482 Length = 10060 Score = 168 bits (85), Expect = 1e-41 Identities = 97/101 (96%) Strand = Plus / Plus Query: 297 aacagacatcaacaaatactaggcatcggtggtttagtggtaaaatccaacgttgccatc 356 |||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 7742 aacacacatcaataactactaagcatcggtggtttagtggtaaaatccaacgttgccatc 7801 Query: 357 gttgggccccgggttcgattcccggccgatgcattcttttt 397 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 7802 gttgggccccgggttcgattcccggccgatgcattcttttt 7842 >3x_Contig1769 Length = 25795 Score = 167 bits (84), Expect = 5e-41 Identities = 93/96 (96%) Strand = Plus / Plus Query: 302 acatcaacaaatactaggcatcggtggtttagtggtaaaatccaacgttgccatcgttgg 361 ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8285 acatcaaaaactactaagcatcggtggtttagtggtaaaatccaacgttgccatcgttgg 8344 Query: 362 gccccgggttcgattcccggccgatgcattcttttt 397 |||||||||||||||||||||||||||||||||||| Sbjct: 8345 gccccgggttcgattcccggccgatgcattcttttt 8380 >3x_Contig1658 Length = 13395 Score = 161 bits (81), Expect = 3e-39 Identities = 84/85 (98%) Strand = Plus / Plus Query: 313 tactaggcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttc 372 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4169 tactaagcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttc 4228 Query: 373 gattcccggccgatgcattcttttt 397 ||||||||||||||||||||||||| Sbjct: 4229 gattcccggccgatgcattcttttt 4253 >3x_Contig340 Length = 1690 Score = 157 bits (79), Expect = 5e-38 Identities = 79/79 (100%) Strand = Plus / Plus Query: 319 gcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttcgattcc 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcatcggtggtttagtggtaaaatccaacgttgccatcgttgggccccgggttcgattcc 306 Query: 379 cggccgatgcattcttttt 397 ||||||||||||||||||| Sbjct: 307 cggccgatgcattcttttt 325 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8835 Number of Sequences: 1807 Number of extensions: 8835 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 5 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)