BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZE09RM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1647 1509 0.0 >3x_Contig1647 Length = 14353 Score = 1509 bits (761), Expect = 0.0 Identities = 801/811 (98%), Gaps = 3/811 (0%) Strand = Plus / Plus Query: 48 tgatagaaacaatgcagtactcggaatacgctacaaagccagtaatatatcggaaaaaaa 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5954 tgatagaaacaatgcagtactcggaatacgctacaaagccagtaatatatcggaaaaaaa 6013 Query: 108 gaattatccgcaatagccataataaccccaaaggaaaatgaatcaaccattgatcactag 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6014 gaattatccgcaatagccataataaccccaaaggaaaatgaatcaaccattgatcactag 6073 Query: 168 cacaatgggcgttggtatttgcatactgagcaccaggcaccggagatcgggtgttaagct 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6074 cacaatgggcgttggtatttgcatactgagcaccaggcaccggagatcgggtgttaagct 6133 Query: 228 aacgttggccaccgggcatccgatcccaatctgtattatggtgatatgcatgcaatgcga 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6134 aacgttggccaccgggcatccgatcccaatctgtattatggtgatatgcatgcaatgcga 6193 Query: 288 acccaaatcgagcaaaaaaagaaaaaaaaattgagaggacctgcatgaaaagaaataaaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6194 acccaaatcgagcaaaaaaagaaaaaaaaattgagaggacctgcatgaaaagaaataaaa 6253 Query: 348 aattccgcgacacacagaaaagtgaaacaaaaagtaactcactctacgagccagcaatat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6254 aattccgcgacacacagaaaagtgaaacaaaaagtaactcactctacgagccagcaatat 6313 Query: 408 gtgttcctgttccaaaaactcaacttttagagtaggaattcagtttctttctctatctag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6314 gtgttcctgttccaaaaactcaacttttagagtaggaattcagtttctttctctatctag 6373 Query: 468 tgcgttagagcagctcatagatcaacgagagaaatcagttcagattttgttagagagaag 527 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6374 tgcgttagagcagctcagagatcaacgagagaaatcagttcagattttgttagagagaag 6433 Query: 528 tacggagaaatgtcccttttctttttttatctctatcttggtgtacttcctatgtgcttg 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6434 tacggagaaatgtcccttttctttttttatctctatcttggtgtacttcctatgtgcttg 6493 Query: 588 gttggtatacgggacgtattgccatttcccagagtatagaccgttcaaaccatccatggc 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6494 gttggtatacgggacgtattgccatttcccagagtatagaccgttcaaaccatccatggc 6553 Query: 648 tacccccccattatggcaanccttcgacgtatcggtagatctacagagttatccctgaac 707 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6554 tacccccccattatggcaa-ccttcgacgtatcggtagatctacagagttatccctgaac 6612 Query: 708 atacatttaagtatatatacatacatgtattatgccattactgatgctgaacactggaaa 767 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 6613 atacatttaagtatatatacatacatgtattatgccattactgatgctgaacactgg-aa 6671 Query: 768 aaaccacagc-acataaatncgnacaataaaatcttacttgtgagtttgcataaattaag 826 |||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 6672 aaacaacagcaacataaatccgcacaataaaatcttacttgtgagtttgcataaattaag 6731 Query: 827 ctatttacgtttttgaaatcaccgctacggt 857 |||||||| |||||| |||||||||||||| Sbjct: 6732 ctatttaccgttttgagatcaccgctacggt 6762 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9110 Number of Sequences: 1807 Number of extensions: 9110 Number of successful extensions: 132 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)