BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZF01RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1641 1241 0.0 >3x_Contig1641 Length = 13261 Score = 1241 bits (626), Expect = 0.0 Identities = 756/790 (95%), Gaps = 8/790 (1%) Strand = Plus / Plus Query: 47 tatgtaattgagac-acaaccgagagaacgaagtcacgtgatggacatctggtgattcca 105 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6705 tatgtaattgagactacaaccgagagaacgaagtcacgtgatggacatctggtgattcca 6764 Query: 106 acgctagatacagcacactgtgtcctaatattgccaaagatcagctagaaatcccaattt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6765 acgctagatacagcacactgtgtcctaatattgccaaagatcagctagaaatcccaattt 6824 Query: 166 caagctgtttagcagtccacagatagtatggattggataagtccccccaaatccagatga 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6825 caagctgtttagcagtccacagatagtatggattggataagtccccccaaatccagatga 6884 Query: 226 aagccgtagggtccctgctatatcacttctttccattgctcagatgttgaatttggtgaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6885 aagccgtagggtccctgctatatcacttctttccattgctcagatgttgaatttggtgaa 6944 Query: 286 acctttgtcacaagttttcggcaattttgttgttttgaaacgaaaatattaaaaggaaga 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6945 acctttgtcacaagttttcggcaattttgttgttttgaaacgaaaatattaaaaggaaga 7004 Query: 346 gttgtttatttcgccacctcaaagatatcagcggatcaagatagcaattggttggaagaa 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7005 gttgtttatttcgccacctcaaagatatcagcggatcaagatagcaattggttggaagaa 7064 Query: 406 ggtggtacaataagctgctgtactgtttaattgaagtttgtttctccaagaatttcaata 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7065 ggtggtacaataagctgctgtactgtttaattgaagtttgtttctccaagaatttcaata 7124 Query: 466 cagtcgacacatcctttttattggttgaaaggacggacgaagagactaanntacagcctt 525 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 7125 cagtcgacacatcctttttattggttgaaaggacggacgaagagactaataacaagcctt 7184 Query: 526 tttttaatagaaacaatggggtcaaa-tttgtctaatcctgntattgataaggaacaaca 584 ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 7185 tttttaatagaaacaat-gggtcaaattttgtctaatcctgtaattgataaggaacaaca 7243 Query: 585 ttctggtagtgatgttttgactgctnttgggttatgtgctatgcaaagatggcgtatgtc 644 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 7244 ttctggtagtgatgttttgactgcttttgggttatgtgctatgcaaggatggcgtatgtc 7303 Query: 645 tattggagattctcacattggtgattggaacatttctgatgatgagaaggagcatttggc 704 ||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 7304 tatggaagattctcacattgttgatttgaacatttctgatgatgagaaggagcatttggc 7363 Query: 705 gtactactgtgtgtttgacggaactggttggttcaagcgttgcttaattttgttggat-a 763 |||||||||||||||||||||| ||| |||||||||||||||| | || || ||||| | Sbjct: 7364 gtactactgtgtgtttgacggacatgg-tggttcaagcgttgctcagttctg-tggatca 7421 Query: 764 cagattttccagaattttacaaaaccagggagctttcaagaagaaatcttaccaacaagg 823 ||| || |||| ||||||||||| |||| |||||||||||||| ||||| |||| ||| Sbjct: 7422 cag-ttctccaagattttacaaaaacaggatgctttcaagaagaagtctta-caacgagg 7479 Query: 824 ctcttattca 833 |||||||||| Sbjct: 7480 ctcttattca 7489 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8229 Number of Sequences: 1807 Number of extensions: 8229 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)