BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC10ZG07FM1.SCF screened BAC_end
         (912 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1754                                                        1582   0.0  

>3x_Contig1754 
          Length = 26052

 Score = 1582 bits (798), Expect = 0.0
 Identities = 815/818 (99%), Gaps = 2/818 (0%)
 Strand = Plus / Plus

                                                                        
Query: 88   tacatgagaccgctgaagtgggattaagaaaaatcggcggagaagatattaatacatgga 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 tacatgagaccgctgaagtgggattaagaaaaatcggcggagaagatattaatacatgga 1193

                                                                        
Query: 148  ctgtgtcgaatactccagcaggtgttctacaatctgaaaaagatctccagtttttgatca 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 ctgtgtcgaatactccagcaggtgttctacaatctgaaaaagatctccagtttttgatca 1253

                                                                        
Query: 208  aatcgcatatcatagcaggtgaattcaagttaaaggatgaaaagtcaatcaaagaatttg 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 aatcgcatatcatagcaggtgaattcaagttaaaggatgaaaagtcaatcaaagaatttg 1313

                                                                        
Query: 268  catggttgacaaaagatgaaatcaagaaagctgttgacgagagatatttcaatagtatac 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 catggttgacaaaagatgaaatcaagaaagctgttgacgagagatatttcaatagtatac 1373

                                                                        
Query: 328  aatatgttcttgctgagaattaacatattatcatcaaacacagaaagtattggcatgatt 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 aatatgttcttgctgagaattaacatattatcatcaaacacagaaagtattggcatgatt 1433

                                                                        
Query: 388  taatcactatatatatatgtaaaccctcctgtaaatactgcttcggatagaaattccaac 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 taatcactatatatatatgtaaaccctcctgtaaatactgcttcggatagaaattccaac 1493

                                                                        
Query: 448  ccgtatcgaacactaaaagataacaatcatatacatattgctgaactctgattgatttta 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1494 ccgtatcgaacactaaaagataacaatcatatacatattgctgaactctgattgatttta 1553

                                                                        
Query: 508  agattggaacattatatacttgtaagaatgctaattaacttttaaatctatcaccatcta 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1554 agattggaacattatatacttgtaagaatgctaattaacttttaaatctatcaccatcta 1613

                                                                        
Query: 568  tcatttggctttctaaaagaagaccctgtgttggagcgaccaaacgacttctcactgaat 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1614 tcatttggctttctaaaagaagaccctgtgttggagcgaccaaacgacttctcactgaat 1673

                                                                        
Query: 628  ttatcagcatctctcttgtatggttgtttgcgcagctctttatccctcttcccgcgctgt 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1674 ttatcagcatctctcttgtatggttgtttgcgcagctctttatccctcttcccgcgctgt 1733

                                                                        
Query: 688  ggtgtgtctctttgagttctactgctccgatcggtgcttttcttaacaaaatcatttcgt 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1734 ggtgtgtctctttgagttctactgctccgatcggtgcttttcttaacaaaatcatttcgt 1793

                                                                        
Query: 748  ttacgatcatcggtcgataccatagttttcggtctgcctgaacgtaaatcaaccattgtc 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1794 ttacgatcatcggtcgataccatagttttcggtctgcctgaacgtaaatcaaccattgtc 1853

                                                                        
Query: 808  attttatcaaaagcaccagtggtgtaaaatattaagcacgactttgaccacttga-tgtg 866
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1854 attttatcaagagcaccagtggtgtaaaatattaagcacgactttgaccacttgattgtg 1913

                                                  
Query: 867  gaacgtgatgaattttt-accaccgtgttgtataggat 903
            ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1914 gaacgtgatgaatttttaaccaccgtgttgtataggat 1951


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8922
Number of Sequences: 1807
Number of extensions: 8922
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)