BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC10ZG08FM1.SCF screened BAC_end
         (935 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1716                                                        1509   0.0  

>3x_Contig1716 
          Length = 19108

 Score = 1509 bits (761), Expect = 0.0
 Identities = 834/852 (97%), Gaps = 6/852 (0%)
 Strand = Plus / Plus

                                                                        
Query: 85   ctcttagggaaaggtttagtgcatctgcaacctcagtacggaccatgtcacgaagcgttg 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4815 ctcttagggaaaggtttagtgcatctgcaacctcagtacggaccatgtcacgaagcgttg 4874

                                                                        
Query: 145  gttgtatagaactgataatccgatcagtttgctgttccaaattttcattaaatttcctag 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4875 gttgtatagaactgataatccgatcagtttgctgttccaaattttcattaaatttcctag 4934

                                                                        
Query: 205  ttatgagctgatttaccaattgagcaacttcctccatgttttcatcatcagataaaggtt 264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4935 ttatgagctgatttaccaattgagcaacttcctccatgttttcatcatcagataaaggtt 4994

                                                                        
Query: 265  cttctgtataatttggcttcgatttcttaaaagatggttcataatcgctcacagactctt 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4995 cttctgtataatttggcttcgatttcttaaaagatggttcataatcgctcacagactctt 5054

                                                                        
Query: 325  cattaccattatcagtttcaggatcataaatggctcctgtcttatttcctttctcatttt 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5055 cattaccattatcagtttcaggatcataaatggctcctgtcttatttcctttctcatttt 5114

                                                                        
Query: 385  catcatcgctgagttcatcagcaaaattagtcgaaagagaacatgggtccatgagtttgt 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5115 catcatcgctgagttcatcagcaaaattagtcgaaagagaacatgggtccatgagtttgt 5174

                                                                        
Query: 445  ttctcatgtcctttctgcatgattgtaataaatcaattacaaattgcttgttagatttct 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5175 ttctcatgtcctttctgcatgattgtaataaatcaattacaaattgcttgttagatttct 5234

                                                                        
Query: 505  tgaaatccaacctttggaatatctcaagaaggacagtaatcaattgagaaaagccggtcg 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5235 tgaaatccaacctttggaatatctcaagaaggacagtaatcaattgagaaaagccggtcg 5294

                                                                        
Query: 565  aagtctgtaattgaatcaacttttgtaattcggtttttagttggtcaagcataggaatat 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5295 aagtctgtaattgaatcaacttttgtaattcggtttttagttggtcaagcataggaatat 5354

                                                                        
Query: 625  cagtctgtgacagtgaggtaccaataggtgtcagagtatgttcattttgatctatcttga 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5355 cagtctgtgacagtgaggtaccaataggtgtcagagtatgttcattttgatctatcttga 5414

                                                                        
Query: 685  caggattaggcactaattcggagacagtaccagttttatcgatgagttgagccaaaaagt 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5415 caggattaggcactaattcggagacagtaccagttttatcgatgagttgagccaaaaggt 5474

                                                                        
Query: 745  gctcttgagactctatgtcaagcggcagagtgcccgttagaaaagcgatattctgcggtg 804
            |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 5475 gctcttgagactctatgtcaagcggcagagtgccggtaagaaaagcgatattctgcggtg 5534

                                                                        
Query: 805  tctttaaggatgggtcc-aggaaattttatgtgtgggaaacactctatagagaagtggtt 863
            ||||||||||||||||| || |||| | ||||||||||||||||||||||||||||||| 
Sbjct: 5535 tctttaaggatgggtccaagaaaatatcatgtgtgggaaacactctatagagaagtggta 5594

                                                                        
Query: 864  agctaattgactaaccctga-ttctaaagaaatcgaacactgcctgtatatcgggccggt 922
            |||| | |||||| | |||| ||| ||||  ||||||||||||||| |||||||| ||||
Sbjct: 5595 agct-agtgactagcactgagttcaaaag--atcgaacactgcctgaatatcggg-cggt 5650

                        
Query: 923  aagtctgtgggg 934
            ||||||||||||
Sbjct: 5651 aagtctgtgggg 5662


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6756
Number of Sequences: 1807
Number of extensions: 6756
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)