BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZG08FM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1716 1509 0.0 >3x_Contig1716 Length = 19108 Score = 1509 bits (761), Expect = 0.0 Identities = 834/852 (97%), Gaps = 6/852 (0%) Strand = Plus / Plus Query: 85 ctcttagggaaaggtttagtgcatctgcaacctcagtacggaccatgtcacgaagcgttg 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4815 ctcttagggaaaggtttagtgcatctgcaacctcagtacggaccatgtcacgaagcgttg 4874 Query: 145 gttgtatagaactgataatccgatcagtttgctgttccaaattttcattaaatttcctag 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4875 gttgtatagaactgataatccgatcagtttgctgttccaaattttcattaaatttcctag 4934 Query: 205 ttatgagctgatttaccaattgagcaacttcctccatgttttcatcatcagataaaggtt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4935 ttatgagctgatttaccaattgagcaacttcctccatgttttcatcatcagataaaggtt 4994 Query: 265 cttctgtataatttggcttcgatttcttaaaagatggttcataatcgctcacagactctt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4995 cttctgtataatttggcttcgatttcttaaaagatggttcataatcgctcacagactctt 5054 Query: 325 cattaccattatcagtttcaggatcataaatggctcctgtcttatttcctttctcatttt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5055 cattaccattatcagtttcaggatcataaatggctcctgtcttatttcctttctcatttt 5114 Query: 385 catcatcgctgagttcatcagcaaaattagtcgaaagagaacatgggtccatgagtttgt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5115 catcatcgctgagttcatcagcaaaattagtcgaaagagaacatgggtccatgagtttgt 5174 Query: 445 ttctcatgtcctttctgcatgattgtaataaatcaattacaaattgcttgttagatttct 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5175 ttctcatgtcctttctgcatgattgtaataaatcaattacaaattgcttgttagatttct 5234 Query: 505 tgaaatccaacctttggaatatctcaagaaggacagtaatcaattgagaaaagccggtcg 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5235 tgaaatccaacctttggaatatctcaagaaggacagtaatcaattgagaaaagccggtcg 5294 Query: 565 aagtctgtaattgaatcaacttttgtaattcggtttttagttggtcaagcataggaatat 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5295 aagtctgtaattgaatcaacttttgtaattcggtttttagttggtcaagcataggaatat 5354 Query: 625 cagtctgtgacagtgaggtaccaataggtgtcagagtatgttcattttgatctatcttga 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5355 cagtctgtgacagtgaggtaccaataggtgtcagagtatgttcattttgatctatcttga 5414 Query: 685 caggattaggcactaattcggagacagtaccagttttatcgatgagttgagccaaaaagt 744 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5415 caggattaggcactaattcggagacagtaccagttttatcgatgagttgagccaaaaggt 5474 Query: 745 gctcttgagactctatgtcaagcggcagagtgcccgttagaaaagcgatattctgcggtg 804 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 5475 gctcttgagactctatgtcaagcggcagagtgccggtaagaaaagcgatattctgcggtg 5534 Query: 805 tctttaaggatgggtcc-aggaaattttatgtgtgggaaacactctatagagaagtggtt 863 ||||||||||||||||| || |||| | ||||||||||||||||||||||||||||||| Sbjct: 5535 tctttaaggatgggtccaagaaaatatcatgtgtgggaaacactctatagagaagtggta 5594 Query: 864 agctaattgactaaccctga-ttctaaagaaatcgaacactgcctgtatatcgggccggt 922 |||| | |||||| | |||| ||| |||| ||||||||||||||| |||||||| |||| Sbjct: 5595 agct-agtgactagcactgagttcaaaag--atcgaacactgcctgaatatcggg-cggt 5650 Query: 923 aagtctgtgggg 934 |||||||||||| Sbjct: 5651 aagtctgtgggg 5662 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6756 Number of Sequences: 1807 Number of extensions: 6756 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)