BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC10ZG11FM1.SCF screened BAC_end
         (933 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1616                                                        1546   0.0  

>3x_Contig1616 
          Length = 10468

 Score = 1546 bits (780), Expect = 0.0
 Identities = 834/849 (98%), Gaps = 3/849 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   acgttacacatttgttttataaagatactctcatcgctaagataacaaaaagagcacaaa 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3269 acgttacacatttgttttataaagatactctcatcgctaagataacaaaaagagcacaaa 3210

                                                                        
Query: 147  aagcacctccctcaacaaaaaaaaaggaagcgctatctcgtatgctctgtaattctaatt 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3209 aagcacctccctcaacaaaaaaaaaggaagcgctatctcgtatgctctgtaattctaatt 3150

                                                                        
Query: 207  atacgtgctaaatanggaccaaattacgcagtggaggtgaattatccagcaaaattattt 266
            |||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3149 atacgtgcgaaaaatggaccaaattacgcagtggaggtgaattatccagcaaaattattt 3090

                                                                        
Query: 267  gtatcataatatatgtttctttccttggctgtacaaaattgtaccattttttttcttaaa 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3089 gtatcataatatatgtttctttccttggctgtacaaaattgtaccattttttttcttaaa 3030

                                                                        
Query: 327  cgacagatgttacaaattttcattgagatggccttttttttcttttaacgagaaaaatat 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3029 cgacagatgttacaaattttcattgagatggccttttttttcttttaacgagaaaaatat 2970

                                                                        
Query: 387  cgacgtgatatttaaagatgaaaaaaaataagatacactgatgatgaactttcgtgtttt 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2969 cgacgtgatatttaaagatgaaaaaaaataagatacactgatgatgaactttcgtgtttt 2910

                                                                        
Query: 447  aggtaatgaaagaaagtgttaactcttgccagcggttcttttaatataagttgtttatac 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2909 aggtaatgaaagaaagtgttaactcttgccagcggttcttttaatataagttgtttatac 2850

                                                                        
Query: 507  catactacgctgtagattatatcaacacacaactcccatagttattcagctaacccttca 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2849 catactacgctgtagattatatcaacacacaactcccatagttattcagctaacccttca 2790

                                                                        
Query: 567  gaaataatgactgaacaagatctagccaagaagcaaaagactgtggatcaaccaccaaga 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2789 gaaataatgactgaacaagatctagccaagaagcaaaagactgtggatcaaccaccaaga 2730

                                                                        
Query: 627  cctcaaaacgtcggtatcaagggtatcgaaatttacatcccatctcaagtatgttcttaa 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2729 cctcaaaacgtcggtatcaagggtatcgaaatttacatcccatctcaagtatgttcttaa 2670

                                                                        
Query: 687  tacgtcaattactgttatagcaactcacgggcttgcatattttgttgaatttgagcgttt 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2669 tacgtcaattactgttatagcaactcacgggcttgcatattttgttgaatttgagcgttt 2610

                                                                        
Query: 747  tcgagacttctgttcctactttngctg-agtacagcggctgtgcaaataagcttaaacga 805
            |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 2609 tcgagacttctgttcctacttt-gctgaagtacagcggctgtgcaaataagcttaaacga 2551

                                                                        
Query: 806  ggaatacaaaaaaaac-gacacagatagttgccaaacaaaagggaattatggnccagttc 864
            |||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||||
Sbjct: 2550 ggaatacaaaaaaaacggacacagatagttgccaaacaagagggaattattggccagttc 2491

                                                                        
Query: 865  tttaattatggatagnaaagcatcatttggaaaaattactagctatcagtttttcggtct 924
            ||||||||||||||| || ||||||||||||||| |||||||||||||| | ||||||||
Sbjct: 2490 tttaattatggataggaaggcatcatttggaaaatttactagctatcagctcttcggtct 2431

                     
Query: 925  cctttcttt 933
             ||||||||
Sbjct: 2430 tctttcttt 2422


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9267
Number of Sequences: 1807
Number of extensions: 9267
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)