BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZG11FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1616 1546 0.0 >3x_Contig1616 Length = 10468 Score = 1546 bits (780), Expect = 0.0 Identities = 834/849 (98%), Gaps = 3/849 (0%) Strand = Plus / Minus Query: 87 acgttacacatttgttttataaagatactctcatcgctaagataacaaaaagagcacaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3269 acgttacacatttgttttataaagatactctcatcgctaagataacaaaaagagcacaaa 3210 Query: 147 aagcacctccctcaacaaaaaaaaaggaagcgctatctcgtatgctctgtaattctaatt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3209 aagcacctccctcaacaaaaaaaaaggaagcgctatctcgtatgctctgtaattctaatt 3150 Query: 207 atacgtgctaaatanggaccaaattacgcagtggaggtgaattatccagcaaaattattt 266 |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3149 atacgtgcgaaaaatggaccaaattacgcagtggaggtgaattatccagcaaaattattt 3090 Query: 267 gtatcataatatatgtttctttccttggctgtacaaaattgtaccattttttttcttaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3089 gtatcataatatatgtttctttccttggctgtacaaaattgtaccattttttttcttaaa 3030 Query: 327 cgacagatgttacaaattttcattgagatggccttttttttcttttaacgagaaaaatat 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3029 cgacagatgttacaaattttcattgagatggccttttttttcttttaacgagaaaaatat 2970 Query: 387 cgacgtgatatttaaagatgaaaaaaaataagatacactgatgatgaactttcgtgtttt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2969 cgacgtgatatttaaagatgaaaaaaaataagatacactgatgatgaactttcgtgtttt 2910 Query: 447 aggtaatgaaagaaagtgttaactcttgccagcggttcttttaatataagttgtttatac 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2909 aggtaatgaaagaaagtgttaactcttgccagcggttcttttaatataagttgtttatac 2850 Query: 507 catactacgctgtagattatatcaacacacaactcccatagttattcagctaacccttca 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2849 catactacgctgtagattatatcaacacacaactcccatagttattcagctaacccttca 2790 Query: 567 gaaataatgactgaacaagatctagccaagaagcaaaagactgtggatcaaccaccaaga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2789 gaaataatgactgaacaagatctagccaagaagcaaaagactgtggatcaaccaccaaga 2730 Query: 627 cctcaaaacgtcggtatcaagggtatcgaaatttacatcccatctcaagtatgttcttaa 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2729 cctcaaaacgtcggtatcaagggtatcgaaatttacatcccatctcaagtatgttcttaa 2670 Query: 687 tacgtcaattactgttatagcaactcacgggcttgcatattttgttgaatttgagcgttt 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2669 tacgtcaattactgttatagcaactcacgggcttgcatattttgttgaatttgagcgttt 2610 Query: 747 tcgagacttctgttcctactttngctg-agtacagcggctgtgcaaataagcttaaacga 805 |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 2609 tcgagacttctgttcctacttt-gctgaagtacagcggctgtgcaaataagcttaaacga 2551 Query: 806 ggaatacaaaaaaaac-gacacagatagttgccaaacaaaagggaattatggnccagttc 864 |||||||||||||||| |||||||||||||||||||||| |||||||||| | ||||||| Sbjct: 2550 ggaatacaaaaaaaacggacacagatagttgccaaacaagagggaattattggccagttc 2491 Query: 865 tttaattatggatagnaaagcatcatttggaaaaattactagctatcagtttttcggtct 924 ||||||||||||||| || ||||||||||||||| |||||||||||||| | |||||||| Sbjct: 2490 tttaattatggataggaaggcatcatttggaaaatttactagctatcagctcttcggtct 2431 Query: 925 cctttcttt 933 |||||||| Sbjct: 2430 tctttcttt 2422 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9267 Number of Sequences: 1807 Number of extensions: 9267 Number of successful extensions: 75 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)