BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZH02FM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig634 1404 0.0 >3x_Contig634 Length = 1748 Score = 1404 bits (708), Expect = 0.0 Identities = 720/723 (99%), Gaps = 1/723 (0%) Strand = Plus / Minus Query: 87 cctgacctctacgtgccttatctaccaagcaacttttcccgttacttcaaatgaaatcat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 cctgacctctacgtgccttatctaccaagcaacttttcccgttacttcaaatgaaatcat 663 Query: 147 caataattaagattagttaaaatgtaaacaaaggcatggggttacgaaacggaaaaacag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 caataattaagattagttaaaatgtaaacaaaggcatggggttacgaaacggaaaaacag 603 Query: 207 taggcgatagagaagcagagatccattgtccacactaggtgtgcttcagcaagcttctat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 taggcgatagagaagcagagatccattgtccacactaggtgtgcttcagcaagcttctat 543 Query: 267 actatggcagaggagctgaaaggatttcctcatgagagactatctatctcattgaggagt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 actatggcagaggagctgaaaggatttcctcatgagagactatctatctcattgaggagt 483 Query: 327 aattcacagcaatatcaagatattcttttgttttttgatgattatcagtttgatttggat 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 aattcacagcaatatcaagatattcttttgttttttgatgattatcagtttgatttggat 423 Query: 387 agcaccaaccagcacttgtgtagtctggcagaattactgttaaagtctcatacactgttg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 agcaccaaccagcacttgtgtagtctggcagaattactgttaaagtctcatacactgttg 363 Query: 447 gcagagctgttttctgatgatgtgagcgtttctcaactcttaccgtattttgattggatt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 gcagagctgttttctgatgatgtgagcgtttctcaactcttaccgtattttgattggatt 303 Query: 507 caagagggaagatctgaattttatcagctcttcaacgggataaagaccatcgaaaaggtg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 caagagggaagatctgaattttatcagctcttcaacgggataaagaccatcgaaaaggtg 243 Query: 567 ttgctgcatctgatggaaatcatcgaagaggaatttgggtgtaatgaagatgaactattc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 ttgctgcatctgatggaaatcatcgaagaggaatttgggtgtaatgaagatgaactattc 183 Query: 627 cagaaggagttgactgcactttttgatttattagaggagatatcagatacattagtgtcc 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cagaaggagttgactgcactttttgatttattagaggagatatcagatacattagtgtcc 123 Query: 687 ataaaaccaatcatctcatcattaaaaaacctgttcgacaccgncatagagttcaacgaa 746 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122 ataaaaccaatcatctcatcattaaaaaacctgttcgacaccgccatagagttcaacgaa 63 Query: 747 atattcaaagatcatatgaacagtctagatgaagagatagaanaacatttgtctaaatgc 806 |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 62 atattcaaagatcatatgaacagtctagatgaagagatagaa-aacaattgtctaaatgc 4 Query: 807 att 809 ||| Sbjct: 3 att 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7310 Number of Sequences: 1807 Number of extensions: 7310 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)