BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC10ZH05FM1.SCF screened BAC_end
         (908 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1468                                                        1477   0.0  

>3x_Contig1468 
          Length = 9852

 Score = 1477 bits (745), Expect = 0.0
 Identities = 806/823 (97%), Gaps = 3/823 (0%)
 Strand = Plus / Plus

                                                                        
Query: 89   aagaagtcatgcaaagtggatagaaagctatcgagtccatagtcgaaaattgataaattt 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7035 aagaagtcatgcaaagtggatagaaagctatcgagtccatagtcgaaaattgataaattt 7094

                                                                        
Query: 149  gagtatttggtagaagggtcatcaacataagttttggtgcttactgcggttgagtactct 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7095 gagtatttggtagaagggtcatcaacataagttttggtgcttactgcggttgagtactct 7154

                                                                        
Query: 209  ggatctatttttagttttggtgacattcttggaatatgcttctctagcaaggaccgtatg 268
            |||||||     ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7155 ggatctaacaagagttttggtgacattcttggaatatgcttctctagcaaggaccgtatg 7214

                                                                        
Query: 269  tcaaagaataactccatgcttttatctgcttctaccatcgaagtttctgctgcgtatacc 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7215 tcaaagaataactccatgcttttatctgcttctaccatcgaagtttctgctgcgtatacc 7274

                                                                        
Query: 329  atcaactgttcgattgcccccaattcgactgcagaagtcattggaaggtctacagcaaca 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7275 atcaactgttcgattgcccccaattcgactgcagaagtcattggaaggtctacagcaaca 7334

                                                                        
Query: 389  gcgaagtcgaattgctttgctcttgtagttggttcagctttgcaccagcctataaagaac 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7335 gcgaagtcgaattgctttgctcttgtagttggttcagctttgcaccagcctataaagaac 7394

                                                                        
Query: 449  gttaagaagatgaagatgagaacaaccttggtgggtttagtgtatattgattcggattct 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7395 gttaagaagatgaagatgagaacaaccttggtgggtttagtgtatattgattcggattct 7454

                                                                        
Query: 509  aaatctctgaggaattgggcgtgcaaactttcaacatccctggaggagaaggatgccaaa 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7455 aaatctctgaggaattgggcgtgcaaactttcaacatccctggaggagaaggatgccaaa 7514

                                                                        
Query: 569  tttttgaaagtatttattatagcaggtaggtaaaatatgataaaaaaatcatcagaggct 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7515 tttttgaaagtatttattatagcaggtaggtaaaatatgataaaaaaatcatcagaggct 7574

                                                                        
Query: 629  agcgatgtaacatggtcaataaccttttgtattaccgttgcattagagagtagattattt 688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7575 agcgatgtaacatggtcaataaccttttgtattaccgttgcattagagagtagattattt 7634

                                                                        
Query: 689  ttggacaaaccgaaaagaacagtacctaacgtgtcatattctttgatcaagaaatccctt 748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7635 ttggacaaaccgaaaagaacagtacctaacgtgtcatattctttgatcaagaaatccctt 7694

                                                                        
Query: 749  ctgaacgtaatattctgtttncgaaccacatcataattatcaaggatttgtgccttattt 808
            ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 7695 ctgaacgtaatattctgtttcgaaaccacatcataattatcaaggatttgtgccttattt 7754

                                                                        
Query: 809  ac-agtgccttcacatcctctagttctttatgnattgtgttggatgcttgcaaaa-attg 866
            || ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||
Sbjct: 7755 acaagtgccttcacatcctctagttctttatggattgtgttgaatgcttgcaaaacattg 7814

                                                       
Query: 867  tttaaaagaat-ccatcacgggtaagtgttttgaaaacatcat 908
            ||||||||| | ||||||| |||||||||||  ||||||||||
Sbjct: 7815 tttaaaagagtcccatcactggtaagtgtttgaaaaacatcat 7857


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7138
Number of Sequences: 1807
Number of extensions: 7138
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)