BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZH05FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1468 1477 0.0 >3x_Contig1468 Length = 9852 Score = 1477 bits (745), Expect = 0.0 Identities = 806/823 (97%), Gaps = 3/823 (0%) Strand = Plus / Plus Query: 89 aagaagtcatgcaaagtggatagaaagctatcgagtccatagtcgaaaattgataaattt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7035 aagaagtcatgcaaagtggatagaaagctatcgagtccatagtcgaaaattgataaattt 7094 Query: 149 gagtatttggtagaagggtcatcaacataagttttggtgcttactgcggttgagtactct 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7095 gagtatttggtagaagggtcatcaacataagttttggtgcttactgcggttgagtactct 7154 Query: 209 ggatctatttttagttttggtgacattcttggaatatgcttctctagcaaggaccgtatg 268 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7155 ggatctaacaagagttttggtgacattcttggaatatgcttctctagcaaggaccgtatg 7214 Query: 269 tcaaagaataactccatgcttttatctgcttctaccatcgaagtttctgctgcgtatacc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7215 tcaaagaataactccatgcttttatctgcttctaccatcgaagtttctgctgcgtatacc 7274 Query: 329 atcaactgttcgattgcccccaattcgactgcagaagtcattggaaggtctacagcaaca 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7275 atcaactgttcgattgcccccaattcgactgcagaagtcattggaaggtctacagcaaca 7334 Query: 389 gcgaagtcgaattgctttgctcttgtagttggttcagctttgcaccagcctataaagaac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7335 gcgaagtcgaattgctttgctcttgtagttggttcagctttgcaccagcctataaagaac 7394 Query: 449 gttaagaagatgaagatgagaacaaccttggtgggtttagtgtatattgattcggattct 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7395 gttaagaagatgaagatgagaacaaccttggtgggtttagtgtatattgattcggattct 7454 Query: 509 aaatctctgaggaattgggcgtgcaaactttcaacatccctggaggagaaggatgccaaa 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7455 aaatctctgaggaattgggcgtgcaaactttcaacatccctggaggagaaggatgccaaa 7514 Query: 569 tttttgaaagtatttattatagcaggtaggtaaaatatgataaaaaaatcatcagaggct 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7515 tttttgaaagtatttattatagcaggtaggtaaaatatgataaaaaaatcatcagaggct 7574 Query: 629 agcgatgtaacatggtcaataaccttttgtattaccgttgcattagagagtagattattt 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7575 agcgatgtaacatggtcaataaccttttgtattaccgttgcattagagagtagattattt 7634 Query: 689 ttggacaaaccgaaaagaacagtacctaacgtgtcatattctttgatcaagaaatccctt 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7635 ttggacaaaccgaaaagaacagtacctaacgtgtcatattctttgatcaagaaatccctt 7694 Query: 749 ctgaacgtaatattctgtttncgaaccacatcataattatcaaggatttgtgccttattt 808 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 7695 ctgaacgtaatattctgtttcgaaaccacatcataattatcaaggatttgtgccttattt 7754 Query: 809 ac-agtgccttcacatcctctagttctttatgnattgtgttggatgcttgcaaaa-attg 866 || ||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| Sbjct: 7755 acaagtgccttcacatcctctagttctttatggattgtgttgaatgcttgcaaaacattg 7814 Query: 867 tttaaaagaat-ccatcacgggtaagtgttttgaaaacatcat 908 ||||||||| | ||||||| ||||||||||| |||||||||| Sbjct: 7815 tttaaaagagtcccatcactggtaagtgtttgaaaaacatcat 7857 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7138 Number of Sequences: 1807 Number of extensions: 7138 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)