BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZH10RM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1522 1362 0.0 >3x_Contig1522 Length = 7810 Score = 1362 bits (687), Expect = 0.0 Identities = 739/750 (98%), Gaps = 5/750 (0%) Strand = Plus / Plus Query: 47 aatctgtaactccaattcatatccacgtgcatgataaggaacagatttcaacaggaaaag 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4478 aatctgtaactccaattcatatccacgtgcatgataaggaacagatttcaacaggaaaag 4537 Query: 107 aactggggtagctacgaaaagtgagaaataaatatcgtatatatccgagtgaagccaagt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4538 aactggggtagctacgaaaagtgagaaataaatatcgtatatatccgagtgaagccaagt 4597 Query: 167 gagtttaacgcaccatcagctcactccaaattgtcatcaaacatatacacttacgccttt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4598 gagtttaacgcaccatcagctcactccaaattgtcatcaaacatatacacttacgccttt 4657 Query: 227 tcaaagaaactcttcaactgtatgtatcaatttgtagcaccatgttttccgtacatatcg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4658 tcaaagaaactcttcaactgtatgtatcaatttgtagcaccatgttttccgtacatatcg 4717 Query: 287 cagaatgtcatatatcatcaaatcttcaggaaagaaaagcagaaaaaaataaaaaaaaaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4718 cagaatgtcatatatcatcaaatcttcaggaaagaaaagcagaaaaaaataaaaaaaaaa 4777 Query: 347 taaaaatggactttttacgttgattaaaatccagtttgtaccctatgggtttagacaact 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4778 taaaaatggactttttacgttgattaaaatccagtttgtaccctatgggtttagacaact 4837 Query: 407 agcactctacatttttatttcaggactatataaaggattctacagggtctgtattgagtt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4838 agcactctacatttttatttcaggactatataaaggattctacagggtctgtattgagtt 4897 Query: 467 cggtgatctgtttccaagtgttgttgaatcctatacccggaagagcgctttccagttcgc 526 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4898 cggtgatctgtttccaagtgttgttgaatcctatacccggaag-gcgctttccagttcgc 4956 Query: 527 gtaacttcgttgttctgttttacacatattcgttttattgtggtttttgagacggaatct 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4957 gtaacttcgttgttctgttttacacatattcgttttattgtggtttttgagacggaatct 5016 Query: 587 catcatatcgttttcagtaacagatactatctctgcttgctgagctcaatctatttc-aa 645 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5017 catcatatcgttttcagtaacagatactatctctgcttgctgagctcaatctatttcaaa 5076 Query: 646 atatagaccgttaaaacaanttgacacgataccttcgtttgtgaaagtgcgtgtgtgatt 705 |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5077 atatagacggttaaaacaagttgacacgataccttcgtttgtgaaagtgcgtgtgtgatt 5136 Query: 706 tttttcccattgggtatcttatctaatctcataaattttttctcttggaaatgggaggga 765 ||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||| Sbjct: 5137 tttttcccattggttatctaatctaatctcataatttttttctctt-gaaatggtaggga 5195 Query: 766 atgttggggaatgacttctggcagcagcac 795 ||||| ||||||||| |||||||||||||| Sbjct: 5196 atgtt-gggaatgac-tctggcagcagcac 5223 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9286 Number of Sequences: 1807 Number of extensions: 9286 Number of successful extensions: 309 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)