BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZA04FM1.SCF screened BAC_end (903 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1449 1267 0.0 >3x_Contig1449 Length = 7865 Score = 1267 bits (639), Expect = 0.0 Identities = 687/702 (97%), Gaps = 1/702 (0%) Strand = Plus / Plus Query: 74 tggcgtagagcttgcacttgtagacggtttagcaagtgtaggtggtgcatgtgagtgatg 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6743 tggcgtagagcttgcacttgtagacggtttagcaagtgtaggtggtgcatgtgagtgatg 6802 Query: 134 ggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaaaaa 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6803 ggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaaaaa 6862 Query: 194 catacagtttttatttt-acatggttgtcccctcaaatacgaggagcagtactttgttgt 252 ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6863 catacagttcggatttggacatggttgtcccctcaaatacgaggagcagtactttgttgt 6922 Query: 253 accatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaataca 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6923 accatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaataca 6982 Query: 313 ttttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttatatg 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6983 ttttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttatatg 7042 Query: 373 actcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgatctt 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7043 actcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgatctt 7102 Query: 433 gttaatttttccatactggccaaaatacttgtccgatctcaagatggatggaagttcttc 492 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7103 gttaattttttcatactggccaaaatacttgtccgatctcaagatggatggaagttcttc 7162 Query: 493 gtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccctcat 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7163 gtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccctcat 7222 Query: 553 accagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctntgctt 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 7223 accagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctttgctt 7282 Query: 613 acgatcacgttcttttctggcctgcttggaacgttccattttcaactcttttggatacag 672 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || Sbjct: 7283 acgatcacgttcttttctggcctgcttggaacgttccattttcaactcttctggagaaag 7342 Query: 673 aacgatgtactcgacgctttcatcgtcgtactttcgaccacaagccggacatcgaccatt 732 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 7343 aacgatgtactcgacgctttcatcgtcgtactttcgacgacaagccggacatcgaccatt 7402 Query: 733 tagctcaggattttgactaatattggtttaacaaaactgaca 774 |||||||||||||||| ||||||| | |||||||||||||| Sbjct: 7403 aagctcaggattttgacgaatattgttataacaaaactgaca 7444 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6322 Number of Sequences: 1807 Number of extensions: 6322 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 903 length of database: 10,358,551 effective HSP length: 16 effective length of query: 887 effective length of database: 10,329,639 effective search space: 9162389793 effective search space used: 9162389793 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)