BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZB04RM1.SCF screened BAC_end (894 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1654 1631 0.0 >3x_Contig1654 Length = 17174 Score = 1631 bits (823), Expect = 0.0 Identities = 839/842 (99%), Gaps = 2/842 (0%) Strand = Plus / Minus Query: 49 taatgacccgcttctgtcaactgtatagtacaaccacacaaaaccagaatatatttatat 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8671 taatgacccgcttctgtcaactgtatagtacaaccacacaaaaccagaatatatttatat 8612 Query: 109 atatatatatatctaattaattccttcattggattccaagttgttctcgcaacctttgat 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8611 atatatatatatctaattaattccttcattggattccaagttgttctcgcaacctttgat 8552 Query: 169 tctctagttgcaacatattgatgcggttcgttgctgcttcagactccagttttcttcttt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8551 tctctagttgcaacatattgatgcggttcgttgctgcttcagactccagttttcttcttt 8492 Query: 229 cacgttcaccaatccattttttccttaattcgtcaattttcagcttggattgtttctcta 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8491 cacgttcaccaatccattttttccttaattcgtcaattttcagcttggattgtttctcta 8432 Query: 289 cctcatcattctgtgatgagccggaccattcttctttttcgttcagaagcagatcgacat 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8431 cctcatcattctgtgatgagccggaccattcttctttttcgttcagaagcagatcgacat 8372 Query: 349 gttctgtgacaattgattcgatggcagattcaataaaaaagaaaactgaatctaattttg 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8371 gttctgtgacaattgattcgatggcagattcaataaaaaagaaaactgaatctaattttg 8312 Query: 409 caattgtctttttgaagaatttggcagagtctagctgttcaaggttatgcaacttattga 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8311 caattgtctttttgaagaatttggcagagtctagctgttcaaggttatgcaacttattga 8252 Query: 469 atgcttggtcaatggactctttttgtagaaccttctcgaatgacccaaaaattgccctta 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8251 atgcttggtcaatggactctttttgtagaaccttctcgaatgacccaaaaattgccctta 8192 Query: 529 aatggtccaagagtttagattttataattgttaactgttgtgatcctttatccgcatctg 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8191 aatggtccaagagtttagattttataattgttaactgttgtgatcctttatccgcatctg 8132 Query: 589 aaaatttattaacgtgctcccgcagttttataatttcatcttgtaaaatatgatggtcgt 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8131 aaaatttattaacgtgctcccgcagttttataatttcatcttgtaaaatatgatggtcgt 8072 Query: 649 tccccaattcttccagttgttcttggagaagctggttatcatccatgtagtatgtcgatt 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8071 tccccaattcttccagttgttcttggagaagctggttatcatccatgtagtatgtcgatt 8012 Query: 709 ttcgcaaagcagttttcaatttcttacggagttccatgacatcttcttctgttctagcct 768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8011 ttcgcaaagcagttttcaatttcttacggagttccatgacatcttcttctgttctagcct 7952 Query: 769 ncaacatttgcatttgagcttgagcatcaatcagcttttgggaaaggtcttttttttcat 828 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7951 ccaacatttgcatttgagcttgagcatcaatcagcttttgggaaaggtcttttttttcat 7892 Query: 829 cttgtaaaacttctatccgaga-tcatattc-atccgttgtgtatgccatcttgctgaat 886 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 7891 cttgtaaaacttctatccgagattcatattcaatccgttgtgtatgccatcttgctgaat 7832 Query: 887 tt 888 || Sbjct: 7831 tt 7830 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,473 Number of Sequences: 1807 Number of extensions: 13473 Number of successful extensions: 1715 Number of sequences better than 1.0e-20: 1 length of query: 894 length of database: 10,358,551 effective HSP length: 16 effective length of query: 878 effective length of database: 10,329,639 effective search space: 9069423042 effective search space used: 9069423042 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)