BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC11ZB05FM1.SCF screened BAC_end
         (919 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1365                                                        1524   0.0  

>3x_Contig1365 
          Length = 9349

 Score = 1524 bits (769), Expect = 0.0
 Identities = 824/837 (98%), Gaps = 4/837 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   tattaactgattcagctactcgcgctcatacggatacatctattgagcagaaactacaag 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8493 tattaactgattcagctactcgcgctcatacggatacatctattgagcagaaactacaag 8434

                                                                        
Query: 146  aaatagaaagacaatatcagttgaatgttatgttgagggatagaattcagaacaccaagg 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8433 aaatagaaagacaatatcagttgaatgttatgttgagggatagaattcagaacaccaagg 8374

                                                                        
Query: 206  aactccttattgtattggtacaattcaagaaaaaggtgatagatcttctacgatgcgacg 265
            |||||||||  | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8373 aactccttacggaagtggtacaattcaagaaaaaggtgatagatcttctacgatgcgacg 8314

                                                                        
Query: 266  ataacttgacaactgcgttgcatgaattatgggacgatctaaaacctctagatgtggctg 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8313 ataacttgacaactgcgttgcatgaattatgggacgatctaaaacctctagatgtggctg 8254

                                                                        
Query: 326  ttaagcttattacaacaagattaaagcagatatatttggagaatgaggaattctattcga 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8253 ttaagcttattacaacaagattaaagcagatatatttggagaatgaggaattctattcga 8194

                                                                        
Query: 386  ttgaccaagtaaacagactggtgaaaaggtataatgaattgagaaatacttcaattgtga 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8193 ttgaccaagtaaacagactggtgaaaaggtataatgaattgagaaatacttcaattgtga 8134

                                                                        
Query: 446  gaaacggctacattgataaaaaatctcaacatattttagatgaattacacattagtgtta 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8133 gaaacggctacattgataaaaaatctcaacatattttagatgaattacacattagtgtta 8074

                                                                        
Query: 506  attcaactcagaacaatgaagattctacaaatacctctattcgatcattgcaggaagatg 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8073 attcaactcagaacaatgaagattctacaaatacctctattcgatcattgcaggaagatg 8014

                                                                        
Query: 566  atcctgaaatagaacatccagattggtcatcgatgcagaaggtaatataacctctgcatc 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8013 atcctgaaatagaacatccagattggtcatcgatgcagaaggtaatataacctctgcatc 7954

                                                                        
Query: 626  tacaattctaaatggagaaaatacacgtgagctgggatcacgtatcctgatggaaattag 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7953 tacaattctaaatggagaaaatacacgtgagctgggatcacgtatcctgatggaaattag 7894

                                                                        
Query: 686  ttaacaataaactttgacttaatattattaaacagtgatatagtaattaaataatagagg 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7893 ttaacaataaactttgacttaatattattaaacagtgatatagtaattaaataatagagg 7834

                                                                        
Query: 746  atgaataaaataaatgacagtgccagtaccctaaaaagt-acgggaataattaaagttcg 804
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   
Sbjct: 7833 atgaataaaataaatgacagtgccagtaccctaaaaagtaacgggaataattaaagtcga 7774

                                                                        
Query: 805  aacatgataaaaaaataaaaagtcgatacagtaccgaaaatgatgaacgccttagataat 864
            ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 7773 aacatgataaaaaaataaaaagtcgatacagtaccgaaaatgatgaacgcctaggataat 7714

                                                                     
Query: 865  aaaat-atgtaatgag-aaaaatgaaatac-atgtaaaagtccgcctagttgattaa 918
            ||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7713 aaaataatgtaatgagaaaaaatgaaatacaatgtaaaagtccgcctagttgattaa 7657


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7765
Number of Sequences: 1807
Number of extensions: 7765
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)