BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZB05FM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1365 1524 0.0 >3x_Contig1365 Length = 9349 Score = 1524 bits (769), Expect = 0.0 Identities = 824/837 (98%), Gaps = 4/837 (0%) Strand = Plus / Minus Query: 86 tattaactgattcagctactcgcgctcatacggatacatctattgagcagaaactacaag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8493 tattaactgattcagctactcgcgctcatacggatacatctattgagcagaaactacaag 8434 Query: 146 aaatagaaagacaatatcagttgaatgttatgttgagggatagaattcagaacaccaagg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8433 aaatagaaagacaatatcagttgaatgttatgttgagggatagaattcagaacaccaagg 8374 Query: 206 aactccttattgtattggtacaattcaagaaaaaggtgatagatcttctacgatgcgacg 265 ||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8373 aactccttacggaagtggtacaattcaagaaaaaggtgatagatcttctacgatgcgacg 8314 Query: 266 ataacttgacaactgcgttgcatgaattatgggacgatctaaaacctctagatgtggctg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8313 ataacttgacaactgcgttgcatgaattatgggacgatctaaaacctctagatgtggctg 8254 Query: 326 ttaagcttattacaacaagattaaagcagatatatttggagaatgaggaattctattcga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8253 ttaagcttattacaacaagattaaagcagatatatttggagaatgaggaattctattcga 8194 Query: 386 ttgaccaagtaaacagactggtgaaaaggtataatgaattgagaaatacttcaattgtga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8193 ttgaccaagtaaacagactggtgaaaaggtataatgaattgagaaatacttcaattgtga 8134 Query: 446 gaaacggctacattgataaaaaatctcaacatattttagatgaattacacattagtgtta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8133 gaaacggctacattgataaaaaatctcaacatattttagatgaattacacattagtgtta 8074 Query: 506 attcaactcagaacaatgaagattctacaaatacctctattcgatcattgcaggaagatg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8073 attcaactcagaacaatgaagattctacaaatacctctattcgatcattgcaggaagatg 8014 Query: 566 atcctgaaatagaacatccagattggtcatcgatgcagaaggtaatataacctctgcatc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8013 atcctgaaatagaacatccagattggtcatcgatgcagaaggtaatataacctctgcatc 7954 Query: 626 tacaattctaaatggagaaaatacacgtgagctgggatcacgtatcctgatggaaattag 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7953 tacaattctaaatggagaaaatacacgtgagctgggatcacgtatcctgatggaaattag 7894 Query: 686 ttaacaataaactttgacttaatattattaaacagtgatatagtaattaaataatagagg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7893 ttaacaataaactttgacttaatattattaaacagtgatatagtaattaaataatagagg 7834 Query: 746 atgaataaaataaatgacagtgccagtaccctaaaaagt-acgggaataattaaagttcg 804 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 7833 atgaataaaataaatgacagtgccagtaccctaaaaagtaacgggaataattaaagtcga 7774 Query: 805 aacatgataaaaaaataaaaagtcgatacagtaccgaaaatgatgaacgccttagataat 864 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 7773 aacatgataaaaaaataaaaagtcgatacagtaccgaaaatgatgaacgcctaggataat 7714 Query: 865 aaaat-atgtaatgag-aaaaatgaaatac-atgtaaaagtccgcctagttgattaa 918 ||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 7713 aaaataatgtaatgagaaaaaatgaaatacaatgtaaaagtccgcctagttgattaa 7657 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7765 Number of Sequences: 1807 Number of extensions: 7765 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)