BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZB05RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1635 1693 0.0 3x_Contig40 174 2e-43 >3x_Contig1635 Length = 12349 Score = 1693 bits (854), Expect = 0.0 Identities = 871/877 (99%) Strand = Plus / Plus Query: 47 gctttgatccatgaaggatattttgtggaaaaggtccatgaattaaccaaaattgactca 106 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1760 gctttgatccatgaaggatattcggtggaaaaggtccatgaattaaccaaaattgactca 1819 Query: 107 tggttcctattcaagtgtatgaacatagtcgacatgtataaagatttggaacaggttaat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1820 tggttcctattcaagtgtatgaacatagtcgacatgtataaagatttggaacaggttaat 1879 Query: 167 gacctggaatctttggacaaagaactgctacttgaagcgaagaaactaggtttttttgat 226 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1880 gacctggaatctttggacaaagaactgctacttgaagcgaagaaactaggtttctctgat 1939 Query: 227 gctcaaatcgcactatgtttgaacaagggtagtgactcaagaacctcagaattagaagtt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1940 gctcaaatcgcactatgtttgaacaagggtagtgactcaagaacctcagaattagaagtt 1999 Query: 287 agaagttacagaaaatcctttggaatcgttccgtttgtcaaacgaattgacaccctagcc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2000 agaagttacagaaaatcctttggaatcgttccgtttgtcaaacgaattgacaccctagcc 2059 Query: 347 gcagaattccctgctcaaacaaactatttatacactacttacaatgctactaagagtgat 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2060 gcagaattccctgctcaaacaaactatttatacactacttacaatgctactaagagtgat 2119 Query: 407 atcgaattcactgataatggtgttctagtgctcggctcaggtgtctacagaataggttca 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2120 atcgaattcactgataatggtgttctagtgctcggctcaggtgtctacagaataggttca 2179 Query: 467 agtgtggaattcgattggtgtgctgttaacaccacaaaggccctcagaaaagaagggaag 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2180 agtgtggaattcgattggtgtgctgttaacaccacaaaggccctcagaaaagaagggaag 2239 Query: 527 aaaactattatgataaattacaatcctgaaacggtttccacagattttgatgaagttgac 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2240 aaaactattatgataaattacaatcctgaaacggtttccacagattttgatgaagttgac 2299 Query: 587 agattgtatttcgaagaactctctttcgagcgtgtcatggatatttacgagttggagaat 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2300 agattgtatttcgaagaactctctttcgagcgtgtcatggatatttacgagttggagaat 2359 Query: 647 tctgaaggttgtgtcatctccgttggtggtcaacttccacagaacatcgctttgaaactt 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2360 tctgaaggttgtgtcatctccgttggtggtcaacttccacagaacatcgctttgaaactt 2419 Query: 707 cttcacaatggtgctcacatattgngtacctctcctgaagacattgacaaggctgaaaac 766 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2420 cttcacaatggtgctcacatattgggtacctctcctgaagacattgacaaggctgaaaac 2479 Query: 767 agacacaagttctcaactattctggattctatcggcgtcaatcaaccagaatggagtgag 826 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2480 agacacaagttctcaactattctggattctatcggcgtcaatcaaccagaatggagtgag 2539 Query: 827 ttgtcttctgttgaagaagctaaagtattcgctaatcaagtgggatacccggttttaatt 886 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2540 ttgtcttctgttgaagaagctaaagtattcgctaatcaagtgggatacccggttttaatt 2599 Query: 887 cgttcatcgtacgtgttgtctggtgctgctatgagtg 923 ||| ||||||||||||||||||||||||||||||||| Sbjct: 2600 cgtccatcgtacgtgttgtctggtgctgctatgagtg 2636 >3x_Contig40 Length = 946 Score = 174 bits (88), Expect = 2e-43 Identities = 280/344 (81%) Strand = Plus / Minus Query: 81 tccatgaattaaccaaaattgactcatggttcctattcaagtgtatgaacatagtcgaca 140 ||||| |||||||||||||| |||||| ||||||||||| | ||| |||||| || ||| Sbjct: 431 tccattaattaaccaaaatttactcatttttcctattcaattttattaacatattctaca 372 Query: 141 tgtataaagatttggaacaggttaatgacctggaatctttggacaaagaactgctacttg 200 | |||||| |||| |||| ||||| |||| ||||||| ||||| |||| |||||| Sbjct: 371 tttataaatatttttaacattttaattacctttaatctttttacaaataacttctacttt 312 Query: 201 aagcgaagaaactaggtttttttgatgctcaaatcgcactatgtttgaacaagggtagtg 260 || | || |||||| ||| | | || |||||||| |||||| ||| ||||| || | Sbjct: 311 aatctaataaactatttttctcttattctcaaatctcactattttttaacaattttattt 252 Query: 261 actcaagaacctcagaattagaagttagaagttacagaaaatcctttggaatcgttccgt 320 |||||| ||||||| ||||| || ||| || ||||| |||||||||| |||| |||| | Sbjct: 251 actcaataacctcataattataatttataatttacataaaatcctttttaatctttcctt 192 Query: 321 ttgtcaaacgaattgacaccctagccgcagaattccctgctcaaacaaactatttataca 380 || |||||| |||| |||||||| || || |||||||| ||||||||||||||||||||| Sbjct: 191 ttttcaaactaatttacaccctatcctcataattcccttctcaaacaaactatttataca 132 Query: 381 ctacttacaatgctactaagagtgatatcgaattcactgataat 424 ||||||||||| ||||||| | | ||||| |||||||| ||||| Sbjct: 131 ctacttacaattctactaatatttatatctaattcacttataat 88 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6577 Number of Sequences: 1807 Number of extensions: 6577 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 2 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)