BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZB08FM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1561 1616 0.0 >3x_Contig1561 Length = 10959 Score = 1616 bits (815), Expect = 0.0 Identities = 828/833 (99%) Strand = Plus / Plus Query: 88 tagaacgttgtaaaatattcaaatcaactttaaccttctcgtcatcgagagattccaaaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 tagaacgttgtaaaatattcaaatcaactttaaccttctcgtcatcgagagattccaaaa 584 Query: 148 ggggcaaagtcctgtataaatcagcatttttggagttaagcctacagcggtaaaattctt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 ggggcaaagtcctgtataaatcagcatttttggagttaagcctacagcggtaaaattctt 644 Query: 208 tagccactgcctcatgtttctcaacaaactttgagcccgaagctgaagatctctccaatt 267 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 tagccactgcctcaagtttctcaacaaactttgagcccgaagctgaagatctctccaatt 704 Query: 268 cttgattaagcctgtcatgtgtcaatgaggtgtttggcttgacacgagtctcgcctatcc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 cttgattaagcctgtcatgtgtcaatgaggtgtttggcttgacacgagtctcgcctatcc 764 Query: 328 acgttgtaacaatatcaaagttttcaggcttcagttcatatattatactgacagtgtttg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 acgttgtaacaatatcaaagttttcaggcttcagttcatatattatactgacagtgtttg 824 Query: 388 acagtttctcgggctgcaaacttaagaattcattcagagcggctggaagcaaaccaacag 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 825 acagtttctcgggctgcaaacttaagaattcattcagagcggctggaagcaaaccaacag 884 Query: 448 tcttctgtggcatgaagacagcgctagatcttttcctagctcttctatccaaagatgaac 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 tcttctgtggcatgaagacagcgctagatcttttcctagctcttctatccaaagatgaac 944 Query: 508 cttcttcaatatggactgttacatcaacaacatgaaatcctaattcaaggttaccgttgt 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 945 cttcttcaatatggactgttacatcaacaacatgaaatcctaattcaaggttaccgttgt 1004 Query: 568 cagtgtctcttaaatggaccgcataatcagaaacttcaccagtttctgaaatggcaatga 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 cagtgtctcttaaatggaccgcataatcagaaacttcaccagtttctgaaatggcaatga 1064 Query: 628 cattttcataagtacgccttgttttgctttgctcttctgaaagcaatacaggtgcaaaac 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1065 cattttcataagtacgccttgttttgctttgctcttctgaaagcaatacaggtgcaaaac 1124 Query: 688 tatctctctcctttgtacggtcctgagggtctaaatattcatcacttaagaaattattgt 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1125 tatctctctcctttgtacggtcctgagggtctaaatattcatcacttaagaaattattgt 1184 Query: 748 ctctcanaattgaatcaatctcagttnttggatcgttcacatcgcctaattgcgagacaa 807 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1185 ctctcaaaattgaatcaatctcagtttttggatcgttcacatcgcctaattgcgagacaa 1244 Query: 808 gagtaccaaagggatgcatagaagtgattggccagcgcttgatgctagcaacgaaaactt 867 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1245 gagtaccaaagggatgcaaagaagtgattggccagcgcttgatgctagcaacgaaaactt 1304 Query: 868 tattcagatacttatcagcattttcgacgaagtccttaagcgcctgttctatc 920 |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1305 tattcagatacttatcagcattttcgacgaagtccttaggcgcctgttctatc 1357 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6095 Number of Sequences: 1807 Number of extensions: 6095 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)