BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZB11RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1286 1629 0.0 >3x_Contig1286 Length = 5608 Score = 1629 bits (822), Expect = 0.0 Identities = 868/878 (98%), Gaps = 4/878 (0%) Strand = Plus / Plus Query: 44 gcttcctcgtcatcacttaatgctgatattgataagccactattctcaatttcatctaaa 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2438 gcttcctcgtcatcacttaatgctgatattgataagccactattctcaatttcatctaaa 2497 Query: 104 agacgagattgggatcttttaaaagtttgagtctgaggctgagaagccggctcattgtcc 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2498 agacgagattgggatcttttaaaagtttgagtctgaggctgagaagccggctcattgtcc 2557 Query: 164 gattctatcgcggtatcattttggaatctgccctccacttctaaggaaaagttgtcactc 223 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 2558 gattctatcgcggtatcattttggaatctgccctccacttctaaggaaaagctgacactc 2617 Query: 224 acactattctcaagcagcaccacgtcatcatcctctacattacgttgtcccaccgaatcg 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2618 acactattctcaagcagcaccacgtcatcatcctctacattacgttgtcccaccgaatcg 2677 Query: 284 ctgagtgacctagccaaagagtaatggattggatccgaagctggcggtccttctctttcc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2678 ctgagtgacctagccaaagagtaatggattggatccgaagctggcggtccttctctttcc 2737 Query: 344 ccttctgatgaaattagtaccacaacaccgttcgcagttccttcattacccactaaagac 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2738 ccttctgatgaaattagtaccacaacaccgttcgcagttccttcattacccactaaagac 2797 Query: 404 tgctctgtagtatcattgatatcaatgatattcacttcatccatttgactatcagtataa 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2798 tgctctgtagtatcattgatatcaatgatattcacttcatccatttgactatcagtataa 2857 Query: 464 ccaaggggcagttgtctatttctatcctatgttaatgattcagttattgtttggcttcga 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2858 ccaaggggcagttgtctatttctatcctatgttaatgattcagttattgtttggcttcga 2917 Query: 524 gagctctgtttacctttttaatggattttaactggttttcaaagaaggtttcgcgtaagt 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2918 gagctctgtttacctttttaatggattttaactggttttcaaagaaggtttcgcgtaagt 2977 Query: 584 gatgagtctaatctgatagtatgatacaacgagatataaccagatatagcctcagttttt 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2978 gatgagtctaatctgatagtatgatacaacgagatataaccagatatagcctcagttttt 3037 Query: 644 atgtagcatttaaatgtagttcgagggaatgtgcgactactaaccatttgaatagttact 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3038 atgtagcatttaaatgtagttcgagggaatgtgcgactactaaccatttgaatagttact 3097 Query: 704 tgtttttgtatcacatgaagtatttatgatctattagtttatacatattatatcgttatg 763 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3098 tgtttttgtatcacatgaagtatttatgatctattagtttatacatattatatcgttatg 3157 Query: 764 atgaagccatttgatctattttctt-atagcatcttctaaacgtttacttgctgacattg 822 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3158 atgaagccatttgatctattttcttaatagcatcttctaaacgtttacttgctgacattg 3217 Query: 823 atatcgcacgtttggttagtactggctttttcttttcatctgtctctgaaactccccgct 882 |||||||||| |||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct: 3218 atatcgcacg-ttggttagtact-gctttttcttttcatctgtctctgtaactcctcgct 3275 Query: 883 tgacaccaatctgaatgcacttttggagatcatctgga 920 |||||||||||||||||||||| ||||||||||||| Sbjct: 3276 gaacaccaatctgaatgcactttt-gagatcatctgga 3312 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6868 Number of Sequences: 1807 Number of extensions: 6868 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)