BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZC11FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig534 741 0.0 >3x_Contig534 Length = 2494 Score = 741 bits (374), Expect = 0.0 Identities = 386/390 (98%) Strand = Plus / Minus Query: 84 atgaatagcggtggtttactccatggctggtctgtatgccttatgggtttctgttaaggt 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 atgaatagcggtggtttactccatggctggtctgtatgccttatgggtttctgttaaggt 331 Query: 144 tactgtgaccccgttttaccctggccattgatgtctttaagagttattatcataattaaa 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 tactgtgaccccgttttaccctggccattgatgtctttaagagttattatcataattaaa 271 Query: 204 agaattaatattttttatggatgactatatgagaaaaactataaggtgatgacttccatc 263 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 agaattaagatggtttatggatgactatatgagaaaaactataaggtgatgacttccatc 211 Query: 264 aacgttcgataacatcgtccaagttttgcctcactttacttttgttagtttccgatctga 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 aacgttcgataacatcgtccaagttttgcctcactttacttttgttagtttccgatctga 151 Query: 324 ttgattcgatctttgctatgatttgagattgcacagctttcatttcccgtgggttagcat 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 ttgattcgatctttgctatgatttgagattgcacagctttcatttcccgtgggttagcat 91 Query: 384 cttgccattcccttaatttgtaggtttgacccgatagatcccagtatatacctcttaccg 443 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 90 cttgccattcccttaatttgtaggtttgacccgatagatcccagtatatacttcttaccg 31 Query: 444 tggtatatatgccgtgtcttccttcccata 473 |||||||||||||||||||||||||||||| Sbjct: 30 tggtatatatgccgtgtcttccttcccata 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6796 Number of Sequences: 1807 Number of extensions: 6796 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)