BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC11ZD04FM1.SCF screened BAC_end
         (908 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig705                                                         1576   0.0  

>3x_Contig705 
          Length = 3163

 Score = 1576 bits (795), Expect = 0.0
 Identities = 814/819 (99%), Gaps = 1/819 (0%)
 Strand = Plus / Minus

                                                                        
Query: 90   cgatatcctgtcaacaaattatgaactgattcatattctttgacagtctcctccgaaaac 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2260 cgatatcctgtcaacaaattatgaactgattcatattctttgacagtctcctccgaaaac 2201

                                                                        
Query: 150  tcgctgatatctattgaatccactttactctgtaattctttaatctccttctcttgctca 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2200 tcgctgatatctattgaatccactttactctgtaattctttaatctccttctcttgctca 2141

                                                                        
Query: 210  ggcttcaatgtttctttgctgttttcactgaaagaaaacttgatcatttcttcaactctt 269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2140 ggcttcaatgtttctttgctgttttcactgaaagaaaacttgatcatttcttcaactctt 2081

                                                                        
Query: 270  aatgcctcaatccttaatagatttaaaatcatgttgtaggtcaacctgaactgcgattgt 329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2080 aatgcctcaatccttaatagatttaaaatcatgttgtaggtcaacctgaactgcgattgt 2021

                                                                        
Query: 330  aagcgtgttggaacgcctaaactcacatctttaaatgaggcctcatcgatcggtctagaa 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2020 aagcgtgttggaacgcctaaactcacatctttaaatgaggcctcatcgatcggtctagaa 1961

                                                                        
Query: 390  taggacataactatgacagtacctgttttatctttacctctacgtcctgctctaccagcc 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1960 taggacataactatgacagtacctgttttatctttacctctacgtcctgctctaccagcc 1901

                                                                        
Query: 450  atttgggtgaattcacccgggaggaggtaccgcttcttttctccatcatgcttttgtatt 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1900 atttgggtgaattcacccgggaggaggtaccgcttcttttctccatcatgcttttgtatt 1841

                                                                        
Query: 510  tcgctaaatacaacagtccttgttggtaagtttaggcccattgcgaaagtttctgttgcg 569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1840 tcgctaaatacaacagtccttgttggtaagtttaggcccattgcgaaagtttctgttgcg 1781

                                                                        
Query: 570  aacaagagtttcacgaaacctttagcaaataaaatttctattagttctttaactatgggc 629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1780 aacaagagtttcacgaaacctttagcaaataaaatttctattagttctttaactatgggc 1721

                                                                        
Query: 630  aaaaggccaccatggtggacagcaatccctcgagataaaagtgatctaattttcgttatt 689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1720 aaaaggccaccatggtggacagcaatccctcgagataaaagtgatctaattttcgttatt 1661

                                                                        
Query: 690  tgtgggagttctctgtcatcctttcttaatctagagatggatttttcaatgaatatatga 749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1660 tgtgggagttctctgtcatcctttcttaatctagagatggatttttcaatgaatatatga 1601

                                                                        
Query: 750  atagctgatctctctttagccgttaaaagatcggctgcttctatagaatcagcatattcc 809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1600 atagctgatctctctttagccgttaaaagatcggctgcttctatagaatcagcatattcc 1541

                                                                        
Query: 810  tcacaacgcttcttactgaaaacgaaga-cacagcagggagccagtcattctgcctcaaa 868
            |||||||||||||||||||||||||||| ||||||||| ||| ||||||||  |||||||
Sbjct: 1540 tcacaacgcttcttactgaaaacgaagaccacagcaggaagcaagtcattcgccctcaaa 1481

                                                   
Query: 869  ttcttaagtaggtcataccaagtagtttttgaagcaccg 907
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 ttcttaagtaggtcataccaagtagtttttgaagcaccg 1442


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6069
Number of Sequences: 1807
Number of extensions: 6069
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)