BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZD04FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig705 1576 0.0 >3x_Contig705 Length = 3163 Score = 1576 bits (795), Expect = 0.0 Identities = 814/819 (99%), Gaps = 1/819 (0%) Strand = Plus / Minus Query: 90 cgatatcctgtcaacaaattatgaactgattcatattctttgacagtctcctccgaaaac 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 cgatatcctgtcaacaaattatgaactgattcatattctttgacagtctcctccgaaaac 2201 Query: 150 tcgctgatatctattgaatccactttactctgtaattctttaatctccttctcttgctca 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2200 tcgctgatatctattgaatccactttactctgtaattctttaatctccttctcttgctca 2141 Query: 210 ggcttcaatgtttctttgctgttttcactgaaagaaaacttgatcatttcttcaactctt 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2140 ggcttcaatgtttctttgctgttttcactgaaagaaaacttgatcatttcttcaactctt 2081 Query: 270 aatgcctcaatccttaatagatttaaaatcatgttgtaggtcaacctgaactgcgattgt 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2080 aatgcctcaatccttaatagatttaaaatcatgttgtaggtcaacctgaactgcgattgt 2021 Query: 330 aagcgtgttggaacgcctaaactcacatctttaaatgaggcctcatcgatcggtctagaa 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2020 aagcgtgttggaacgcctaaactcacatctttaaatgaggcctcatcgatcggtctagaa 1961 Query: 390 taggacataactatgacagtacctgttttatctttacctctacgtcctgctctaccagcc 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1960 taggacataactatgacagtacctgttttatctttacctctacgtcctgctctaccagcc 1901 Query: 450 atttgggtgaattcacccgggaggaggtaccgcttcttttctccatcatgcttttgtatt 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1900 atttgggtgaattcacccgggaggaggtaccgcttcttttctccatcatgcttttgtatt 1841 Query: 510 tcgctaaatacaacagtccttgttggtaagtttaggcccattgcgaaagtttctgttgcg 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1840 tcgctaaatacaacagtccttgttggtaagtttaggcccattgcgaaagtttctgttgcg 1781 Query: 570 aacaagagtttcacgaaacctttagcaaataaaatttctattagttctttaactatgggc 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1780 aacaagagtttcacgaaacctttagcaaataaaatttctattagttctttaactatgggc 1721 Query: 630 aaaaggccaccatggtggacagcaatccctcgagataaaagtgatctaattttcgttatt 689 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1720 aaaaggccaccatggtggacagcaatccctcgagataaaagtgatctaattttcgttatt 1661 Query: 690 tgtgggagttctctgtcatcctttcttaatctagagatggatttttcaatgaatatatga 749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1660 tgtgggagttctctgtcatcctttcttaatctagagatggatttttcaatgaatatatga 1601 Query: 750 atagctgatctctctttagccgttaaaagatcggctgcttctatagaatcagcatattcc 809 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1600 atagctgatctctctttagccgttaaaagatcggctgcttctatagaatcagcatattcc 1541 Query: 810 tcacaacgcttcttactgaaaacgaaga-cacagcagggagccagtcattctgcctcaaa 868 |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||| Sbjct: 1540 tcacaacgcttcttactgaaaacgaagaccacagcaggaagcaagtcattcgccctcaaa 1481 Query: 869 ttcttaagtaggtcataccaagtagtttttgaagcaccg 907 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1480 ttcttaagtaggtcataccaagtagtttttgaagcaccg 1442 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6069 Number of Sequences: 1807 Number of extensions: 6069 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)