BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZD06FM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1667 1435 0.0 >3x_Contig1667 Length = 12071 Score = 1435 bits (724), Expect = 0.0 Identities = 831/855 (97%), Gaps = 9/855 (1%) Strand = Plus / Minus Query: 86 ctgctatatgtatccctgccatggcactaggagattcgattagtatatctataccttgac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6622 ctgctatatgtatccctgccatggcactaggagattcgattagtatatctataccttgac 6563 Query: 146 atccctcccaagctgtatccaacagagatgagatccaagtagaaaagtttgtagaagcgt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6562 atccctcccaagctgtatccaacagagatgagatccaagtagaaaagtttgtagaagcgt 6503 Query: 206 ccctcaataaacttttgttcattgatccatgctgtaccatcaaagatattagttctgcag 265 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6502 ccctcaataaacccatgttcattgatccatgctgtaccatcaaagatattagttctgcag 6443 Query: 266 gattaccagatatttctctaaatcctatattatgagaaactatccaatccttaaattctc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6442 gattaccagatatttctctaaatcctatattatgagaaactatccaatccttaaattctc 6383 Query: 326 catgagttagtataataacttcatgaccttcggcttgcaaaccctttgccaatgcaatat 385 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6382 catgagttagtataataacttcatgac-ttcggcttgcaaaccctttgccaatgcaatat 6324 Query: 386 atggttgtacatcacctcttgaaccgattgtaagtaatccgaatttgtagcttttactag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6323 atggttgtacatcacctcttgaaccgattgtaagtaatccgaatttgtagcttttactag 6264 Query: 446 gtttgattacagtggtgaaatacgggtttttttcaacgattaatggaatatcaaagcctt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6263 gtttgattacagtggtgaaatacgggtttttttcaacgattaatggaatatcaaagcctt 6204 Query: 506 gttcactaattttttcttctaataatttgagactcgcagcttctgagaggcggtgaacaa 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6203 gttcactaattttttcttctaataatttgagactcgcagcttctgagaggcggtgaacaa 6144 Query: 566 cttcagctgtagactttcgttttagcgttgaccgatgactacttacagcatccatgactt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6143 cttcagctgtagactttcgttttagcgttgaccgatgactacttacagcatccatgactt 6084 Query: 626 taatcatcacaaactcacaatcatctcgagcattcttgttaccaaattctaagaatagtt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6083 taatcatcacaaactcacaatcatctcgagcattcttgttaccaaattctaagaatagtt 6024 Query: 686 cttcatgaccgtgaataacaattactaaaccaaaataaccaaatctaaaacgcgttttcc 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 6023 cttcatgaccgtgaataacaattactaaaccaaaataaccaaatctaaaacgcg-tttcc 5965 Query: 746 ttgtagcagtttctcaacatccctccaacgttagcaccgttttagtgctaactncaggc- 804 ||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||| Sbjct: 5964 ttgtagcag-ttctcaacat-cctccaacggtagcaccgttttagtgctaactccaggca 5907 Query: 805 aaagagatcggaaacatatattcttgtccgatatat-aatctttccgtattgggaaacgt 863 |||||||||||||||||||||||||||||||||||| |||||| |||||| || ||||| Sbjct: 5906 aaagagatcggaaacatatattcttgtccgatatataaatcttcccgtatatgggaacgt 5847 Query: 864 tcttattgagttatccattggaactggctactagggttcgcttgtttc-tcaaaaaagaa 922 || ||||||| ||||||| | |||||||||||| ||||||| |||||| ||||| |||| Sbjct: 5846 tcctattgaggtatccatggtaactggctacta-ggttcgc-tgtttcgtcaaaggagaa 5789 Query: 923 atgctgcctgaaacg 937 ||||||||||||||| Sbjct: 5788 atgctgcctgaaacg 5774 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6311 Number of Sequences: 1807 Number of extensions: 6311 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)