BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC11ZD09FM1.SCF screened BAC_end
         (953 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1577                                                        1455   0.0  

>3x_Contig1577 
          Length = 10627

 Score = 1455 bits (734), Expect = 0.0
 Identities = 806/821 (98%), Gaps = 7/821 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   tttatgctccaatgcagtgaaacctgaaacagaggaaatgtagttttttagaatatcttg 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8276 tttatgctccaatgcagtgaaacctgaaacagaggaaatgtagttttttagaatatcttg 8217

                                                                        
Query: 147  aaattgcatcgggtcatactgttcctgggcttttaagttgcatttgtcagtgttcaactg 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8216 aaattgcatcgggtcatactgttcctgggcttttaagttgcatttgtcagtgttcaactg 8157

                                                                        
Query: 207  tcccaatgattttttttttgattcaatgtgatactgagtttgttgcaattgctgttgagc 266
            ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8156 tcccaatgattttttctctgattcaatgtgatactgagtttgttgcaattgctgttgagc 8097

                                                                        
Query: 267  cttcgctagtttcactctcaaatcttgtaattcaacctgggagttaacaacaaaatgttc 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8096 cttcgctagtttcactctcaaatcttgtaattcaacctgggagttaacaacaaaatgttc 8037

                                                                        
Query: 327  atcatcgtgccatacactcgaaggttcgtatagaaaatctttgggttccttccatgattt 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8036 atcatcgtgccatacactcgaaggttcgtatagaaaatctttgggttccttccatgattt 7977

                                                                        
Query: 387  catgttatgctttatgaacattgacgtgtccaaataaggtttatttttggctatgactga 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7976 catgttatgctttatgaacattgacgtgtccaaataaggtttatttttggctatgactga 7917

                                                                        
Query: 447  atcagctgcatccaatctcgaatcaattgttttattcaattctctctctaagacacctgc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7916 atcagctgcatccaatctcgaatcaattgttttattcaattctctctctaagacacctgc 7857

                                                                        
Query: 507  tttattccatattatatttaacatggcagccctcgactcgttgatgtcttgaaggatatc 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7856 tttattccatattatatttaacatggcagccctcgactcgttgatgtcttgaaggatatc 7797

                                                                        
Query: 567  taagatctctggcacatcttggaaaaagtatttgtccttgactctattggcttggttgat 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7796 taagatctctggcacatcttggaaaaagtatttgtccttgactctattggcttggttgat 7737

                                                                        
Query: 627  tttagttagatagtcatttttgctgatgttcatttcatgctctttttcagcttgccttct 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7736 tttagttagatagtcatttttgctgatgttcatttcatgctctttttcagcttgccttct 7677

                                                                        
Query: 687  ctgcgccttttcagagctggatttagaactctttgatctggctgtttccataacttgaca 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7676 ctgcgccttttcagagctggatttagaactctttgatctggctgtttccataacttgaca 7617

                                                                        
Query: 747  ngaatcgtagtatctttttcttagcttttctctaagttttcataacatgtagtcctttct 806
             ||||||||||||| | |||||||| |||||||||||||||||| |||||||| ||||||
Sbjct: 7616 agaatcgtagtatc-tcttcttagc-tttctctaagttttcatagcatgtagt-ctttct 7560

                                                                        
Query: 807  tccagaaacttcagcaattcaacttttcagcactaattacttggctattgcatcgggttc 866
            ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct: 7559 tccagaaacttcagc-attcaacttttcagcactaatcactaggctattgcatc-ggttc 7502

                                                     
Query: 867  gtcaaaattttcaattggctcacagatgtgggaatgcaatg 907
            |||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 7501 gtcaaagttttcaatt-gctcacagatgt-ggaatgcaatg 7463


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8780
Number of Sequences: 1807
Number of extensions: 8780
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)