BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZD11FM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1340 1562 0.0 >3x_Contig1340 Length = 7156 Score = 1562 bits (788), Expect = 0.0 Identities = 819/828 (98%), Gaps = 1/828 (0%) Strand = Plus / Plus Query: 86 tactggatccactaatcctaccataggtaggaacaccgtttgtctggaagaagtcttgat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4057 tactggatccactaatcctaccataggtaggaacaccgtttgtctggaagaagtcttgat 4116 Query: 146 tacagcagctttacccttagcggcattatctaaattgacattaccgccttgagtgtcaat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4117 tacagcagctttacccttagcggcattatctaaattgacattaccgccttgagtgtcaat 4176 Query: 206 ctcgttggatttttgtaattcatccatatccataatttcaacaacattcgccactaaata 265 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4177 ctcgttggaatcctgtaattcatccatatccataatttcaacaacattcgccactaaata 4236 Query: 266 cggtaattgtttgttattcttgatcttttcttgattatccttaatcttctctagcatctg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4237 cggtaattgtttgttattcttgatcttttcttgattatccttaatcttctctagcatctg 4296 Query: 326 actgttttcatgagacaaacgttgtagttcggatctgaatatcctaatttcgttatctag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4297 actgttttcatgagacaaacgttgtagttcggatctgaatatcctaatttcgttatctag 4356 Query: 386 caacttcgcacgagtagttagttcggaagctgatagattgaaaaattcttgatcgatatc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4357 caacttcgcacgagtagttagttcggaagctgatagattgaaaaattcttgatcgatatc 4416 Query: 446 atcatcatctggctgactttggttattcaattcttctaacgtagacatcacttattcgtg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4417 atcatcatctggctgactttggttattcaattcttctaacgtagacatcacttattcgtg 4476 Query: 506 tttatatgtatgtctattttctttgccaatctcaaacaatgtttcctcaatataatacct 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4477 tttatatgtatgtctattttctttgccaatctcaaacaatgtttcctcaatataatacct 4536 Query: 566 ataaaaacgttgtgcttttccagctcgcttctctttacaagggttttggtaccaattgca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4537 ataaaaacgttgtgcttttccagctcgcttctctttacaagggttttggtaccaattgca 4596 Query: 626 cagtctagtattaatcacagacagatggactaccgtgttcttctcacttttaaatcgtct 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4597 cagtctagtattaatcacagacagatggactaccgtgttcttctcacttttaaatcgtct 4656 Query: 686 tttgccaccagaacctggtatttcagaacatatacattgattaaatgaatttgttaagct 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4657 tttgccaccagaacctggtatttcagaacatatacattgattaaatgaatttgttaagct 4716 Query: 746 ttaaagatcccattg-aaaaaagggcagaaattaaaatatccgggtaacgaaatatttat 804 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4717 ttaaagatcccattgaaaaaaagggcagaaattaaaatatccgggtaacgaaatatttat 4776 Query: 805 ttcattaaaatcgatatactatttacttataatatacgtatagtttagtggtatagatct 864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4777 ttcattaaaatcgatatactatttacttataatatacgtatagtttagtggtatagatct 4836 Query: 865 atggtacagtggtgggtgtgggtattttaatgatatcaaatctttaat 912 ||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 4837 atggtacagtggtgggtgtggtaataataatgatatcaaatcattaat 4884 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8103 Number of Sequences: 1807 Number of extensions: 8103 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)