BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZE04FM1.SCF screened BAC_end (898 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1617 1594 0.0 3x_Contig1806 103 6e-22 >3x_Contig1617 Length = 15119 Score = 1594 bits (804), Expect = 0.0 Identities = 811/812 (99%), Gaps = 1/812 (0%) Strand = Plus / Plus Query: 87 gaatctgaaaacaatagagactataattcttatcgttttcaccaattatctcggcagaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4651 gaatctgaaaacaatagagactataattcttatcgttttcaccaattatctcggcagaaa 4710 Query: 147 gttttctttgagattagaaatttaattggacgattatacgttaatatctttgaacactgg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4711 gttttctttgagattagaaatttaattggacgattatacgttaatatctttgaacactgg 4770 Query: 207 ttggtgtcttactttcgtttgaattacgttgttacactttgataaacacacggggagtga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4771 ttggtgtcttactttcgtttgaattacgttgttacactttgataaacacacggggagtga 4830 Query: 267 ctgagaataaagttagtattatttcataaatcaagatgagcagtgttgcagcatcgcaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4831 ctgagaataaagttagtattatttcataaatcaagatgagcagtgttgcagcatcgcaaa 4890 Query: 327 ataaaatcaacgatttactggaagcaatcaggcaagagtttgccaatgtttcgcaagaag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4891 ataaaatcaacgatttactggaagcaatcaggcaagagtttgccaatgtttcgcaagaag 4950 Query: 387 caaactcttaccgtttgcaaaaccaaaaggattatgattttaagattaatcaacaattag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4951 caaactcttaccgtttgcaaaaccaaaaggattatgattttaagattaatcaacaattag 5010 Query: 447 cagaaatgcaacaggttagaaataccgtttatgagttggaattgactcacagaaaaatga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5011 cagaaatgcaacaggttagaaataccgtttatgagttggaattgactcacagaaaaatga 5070 Query: 507 aagatgcgtatgaggaggagattagcagattgaagttggaattagaacaaaaagatcgcc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5071 aagatgcgtatgaggaggagattagcagattgaagttggaattagaacaaaaagatcgcc 5130 Query: 567 aattggcctctattgcccatggaagtaccgttggtaatgttccaggtcaagttcctcagc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5131 aattggcctctattgcccatggaagtaccgttggtaatgttccaggtcaagttcctcagc 5190 Query: 627 ttagtagaaattctggtgctcagggaaatgctaacattgcgccaccaaatattccgcaac 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5191 ttagtagaaattctggtgctcagggaaatgctaacattgcgccaccaaatattccgcaac 5250 Query: 687 caatggtttcgcaaactgtaggtactggtatggccccacaaatggctcctttgaacactc 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5251 caatggtttcgcaaactgtaggtactggtatggccccacaaatggctcctttgaacactc 5310 Query: 747 aacatcctactcagcaaactaagtctaatgctggagagcaagcggccgctaatttggctc 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5311 aacatcctactcagcaaactaagtctaatgctggagagcaagcggccgctaatttggctc 5370 Query: 807 ctgtcattcagcagcagcaacaacctcagcaac-attaccaccacaacagcagcagcaac 865 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5371 ctgtcattcagcagcagcaacaacctcagcaacaattaccaccacaacagcagcagcaac 5430 Query: 866 agcagcagcagcaacagtctaacatcccagtt 897 |||||||||||||||||||||||||||||||| Sbjct: 5431 agcagcagcagcaacagtctaacatcccagtt 5462 >3x_Contig1806 Length = 53694 Score = 103 bits (52), Expect = 6e-22 Identities = 79/88 (89%) Strand = Plus / Plus Query: 553 acaaaaagatcgccaattggcctctattgcccatggaagtaccgttggtaatgttccagg 612 |||||| ||||| |||||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 40969 acaaaatgatcgtcaattggcctcttctgccctaggaagtaccgttggtattgttccagg 41028 Query: 613 tcaagttcctcagcttagtagaaattct 640 |||| || |||||||||||||||||||| Sbjct: 41029 tcaatttactcagcttagtagaaattct 41056 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7854 Number of Sequences: 1807 Number of extensions: 7854 Number of successful extensions: 451 Number of sequences better than 1.0e-20: 2 length of query: 898 length of database: 10,358,551 effective HSP length: 16 effective length of query: 882 effective length of database: 10,329,639 effective search space: 9110741598 effective search space used: 9110741598 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)