BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZF10RM1.SCF screened BAC_end (899 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig187 1108 0.0 >3x_Contig187 Length = 1332 Score = 1108 bits (559), Expect = 0.0 Identities = 566/567 (99%), Gaps = 1/567 (0%) Strand = Plus / Minus Query: 50 ggaacaactccaaaaaaaaataacaacaattgccatgggatcttcagaatcctgtaaaat 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 ggaacaactccaaaaaaaaataacaacaattgccatgggatcttcagaatcctgtaaaat 521 Query: 110 agctgaagaaacgttgaacgactgtgttgaagttggtggttgggtcttactacagaacat 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 agctgaagaaacgttgaacgactgtgttgaagttggtggttgggtcttactacagaacat 461 Query: 170 ccaaatgtccttgacgtggtgtaatgaaatattgccaaagtacttaaagcagattatttc 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 ccaaatgtccttgacgtggtgtaatgaaatattgccaaagtacttaaagcagattatttc 401 Query: 230 caatagcaacgaaaacttcaaattgtttatgacttgtagcttacaagatagcatacatcc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 caatagcaacgaaaacttcaaattgtttatgacttgtagcttacaagatagcatacatcc 341 Query: 290 aagttctcaacttttacagtatagtacgaagatagcttacgaaggcgaatctggagtatt 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagttctcaacttttacagtatagtacgaagatagcttacgaaggcgaatctggagtatt 281 Query: 350 atacaaagtcaaaaaattctgggagctaattattcaaaagaaacccgtcgaaggaacggg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 atacaaagtcaaaaaattctgggagctaattattcaaaagaaacccgtcgaaggaacggg 221 Query: 410 cttatacttaaaacacttggtctgctggatacactcgttgcttttggagcgcgtgaaaat 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 cttatacttaaaacacttggtctgctggatacactcgttgcttttggagcgcgtgaaaat 161 Query: 470 cactaccaaagacgtcgaataccatgatttagatctggagctagccattaatgcggtgga 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 cactaccaaagacgtcgaataccatgatttagatctggagctagccattaatgcggtgga 101 Query: 530 aaactgtgtcgacaatgaggcaattgattggccaaaactaagatttattgttggaaa-gc 588 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 100 aaactgtgtcgacaatgaggcaattgattggccaaaactaagatttattgttggaaaggc 41 Query: 589 tcatatactgcaataggttggacaaga 615 ||||||||||||||||||||||||||| Sbjct: 40 tcatatactgcaataggttggacaaga 14 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6395 Number of Sequences: 1807 Number of extensions: 6395 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 899 length of database: 10,358,551 effective HSP length: 16 effective length of query: 883 effective length of database: 10,329,639 effective search space: 9121071237 effective search space used: 9121071237 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)