BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZG02FM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1404 1467 0.0 >3x_Contig1404 Length = 8096 Score = 1467 bits (740), Expect = 0.0 Identities = 803/820 (97%), Gaps = 3/820 (0%) Strand = Plus / Plus Query: 88 ttccctcaaattaccgacattgaaaacaaaacaaatcgttgggtttcaaaaatttatcag 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 ttccctcaaattaccgacattgaaaacaaaacaaatcgttgggtttcaaaaatttatcag 383 Query: 148 acatcttttcgaatatctcagctgactttgcacatgctaattgaaaaatatatgatgctt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 384 acatcttttcgaatatctcagctgactttgcacatgctaattgaaaaatatatgattctt 443 Query: 208 ttggacctacttgttttgtcaattgcgggtttagaaacatcatctgaaataaattcgttg 267 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ttggacctacaagacttgtcaattgcgggtttagaaacatcatctgaaataaattcgttg 503 Query: 268 ttatctgccaagttctcatcagaaactctttcattcaatttgttgtatcttgaccgtatc 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 ttatctgccaagttctcatcagaaactctttcattcaatttgttgtatcttgaccgtatc 563 Query: 328 atctcaagaattctgcttgagaaagttacagcaaatttctttggcacagaaaatgaaaat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 atctcaagaattctgcttgagaaagttacagcaaatttctttggcacagaaaatgaaaat 623 Query: 388 atcaggttcttcacttcaaatattggtagtgtagtactagactcatcagacctaacctta 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 atcaggttcttcacttcaaatattggtagtgtagtactagactcatcagacctaacctta 683 Query: 448 accgaaatgatgaagcatgctcgggccctcctagcttcaatagatgatatgaaagccatt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 684 accgaaatgatgaagcatgctcgggccctcctagcttcaatagatgatatgaaagccatt 743 Query: 508 actcccgaccatgattcagaaaaaaaaaatggtcacgtcgacttagtatgggttctctcc 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 actcccgaccatgattcagaaaaaaaaaatggtcacgtcgacttagtatgggttctctcc 803 Query: 568 ctgaaggttggatcattgcaacttcaaacttcggcttttgttccttttattatacgcatt 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 ctgaaggttggatcattgcaacttcaaacttcggcttttgttccttttattatacgcatt 863 Query: 628 ctgatcagtggtttagacttcaatttcaaaaatctttctggtatttcaattattgtgaat 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 864 ctgatcagtggtttagacttcaatttcaaaaatctttctggtatttcaattattgtgaat 923 Query: 688 tatacagagcttttgttggacttctattttaaccagttgaaattgttgcgaatctccaat 747 |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 924 tatacagagcttttgttggacttctatttttaccagttgatattgttgcgaatctccaat 983 Query: 748 tctgtcacgaaggtagattatagaagtaatacttttgctgactgacattggattagacac 807 |||||||||||||||||||||||| || |||| |||||||||||| |||||||||||||| Sbjct: 984 tctgtcacgaaggtagattatagatgttatac-tttgctgactgatattggattagacac 1042 Query: 808 tgacatcgtgaaattgacactatcagatacccgtgtttacatntgaagaacttaccgaca 867 ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| Sbjct: 1043 tgacatcgtgaaattgacactatcagataaccgtgtttacat-tgaagaactcaccgaca 1101 Query: 868 gtcttaatggtacggtatctgaacttaattaggattttca 907 |||| ||||||||||||||||||| |||||| |||||||| Sbjct: 1102 gtctaaatggtacggtatctgaac-taattaagattttca 1140 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9029 Number of Sequences: 1807 Number of extensions: 9029 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)