BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZG03RM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig977 866 0.0 3x_Contig498 682 0.0 >3x_Contig977 Length = 3887 Score = 866 bits (437), Expect = 0.0 Identities = 440/441 (99%) Strand = Plus / Plus Query: 51 aagaattggaggcacaatctgccaaagagttacaaaagagaattcaagaacttgaaagaa 110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3253 aagaattggaggcacaatctgccaaagagttacaaaagagaattcaagaacttgaaagaa 3312 Query: 111 aggctattgaattgaagatgaaggaaaagctactaagacaaaactcacatagtcaatctc 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3313 aggctattgaattgaagatgaaggaaaagctactaagacaaaactcacatagtcaatctc 3372 Query: 171 aagaatctatccagactaatacaactaaacaaaattcaacttctggaggtgcttacatta 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3373 aagaatctatccagactaatacaactaaacaaaattcaacttctggaggtgcttacatta 3432 Query: 231 agaaagaggaaacctataacgatttagcttcgataatcagcaaaaaagaatgaattcagt 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3433 agaaagaggaaacctataacgatttagcttcgataatcagcaaaaaagaatgaattcagt 3492 Query: 291 cttgatatctttctttggcatttttgtaagtcgaagtgtttggttcctgaaacgatttca 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3493 cttgatatctttctttggcatttttgtaagtcgaagtgtttggttcctgaaacgatttca 3552 Query: 351 tatgtaatttaaacaatattgattattttgtatattgcaaacggtcacgtctagattgat 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3553 tatgtaatttaaacaatattgattattttgtatattgcaaacggtcacgtctagattgat 3612 Query: 411 ctgctacctgtttccaaatttgatgagtttaagatggtgatgtaaaaatcagaaaaatat 470 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3613 ctgctacctgtttccaaatttgatgagtttaagatggtgatgtaaaaatcagaaaaataa 3672 Query: 471 acgtactgttacaggtatata 491 ||||||||||||||||||||| Sbjct: 3673 acgtactgttacaggtatata 3693 >3x_Contig498 Length = 2351 Score = 682 bits (344), Expect = 0.0 Identities = 404/420 (96%), Gaps = 3/420 (0%) Strand = Plus / Plus Query: 505 taataatgagttaaggtattttcgtgccacttatcaataaatggaatttatctgttcaga 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 taataatgagttaaggtattttcgtgccacttatcaataaatggaatttatctgttcaga 591 Query: 565 tgacatagtattatgagataaaaaagattggtgaaaaatttatgttcatccagtgcttca 624 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 tgacatagtattatgagataaaaaagattggtggggaatttatgttcatccagtgcttca 651 Query: 625 agataaaaaatagctagtgtaactggagagaactaagaaaaccgaaaaatgcaaaataat 684 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 agatgggaaatagctagtgtaactggagagaactaagaaaaccgaaaaatgcaaaataat 711 Query: 685 gttcccgatggcaattaaaaacatcaagaaacaacattcattcagcgacgatgagaaaag 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 gttcccgatggcaattaaaaacatcaagaaacaacattcattcagcgacgatgagaaaag 771 Query: 745 gcactgg-gggaaataataggaaaagagatttaaccgaattgaaaaatggttgcaaaata 803 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gcactggcgggaaataataggaaaagagatttaaccgaattgaaaaatggttgcaaaata 831 Query: 804 acattaaagagttgggaaacagacatatttgatcaataaagacttcaagtgcgaacataa 863 ||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||| Sbjct: 832 acattaaagagttggaaacaagacataattgatcaataaagacttcaagtgcgaacataa 891 Query: 864 gtcattttaacaaacgc-aaaaaggggtatgacgacgtaaatatgaaatgttagaaaaag 922 ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||| Sbjct: 892 gtcattttaac-aacgcaaaaaagggttatgacgacgtaaatatgaagtgtaagaaaaag 950 Score = 234 bits (118), Expect = 3e-61 Identities = 262/310 (84%) Strand = Plus / Plus Query: 60 aggcacaatctgccaaagagttacaaaagagaattcaagaacttgaaagaaaggctattg 119 ||||||||||| ||||| | | |||| | | ||||||| ||||| ||| ||| ||||| Sbjct: 87 aggcacaatctcccaaacactcacaatatataattcaacaacttaaaataaattctattc 146 Query: 120 aattgaagatgaaggaaaagctactaagacaaaactcacatagtcaatctcaagaatcta 179 |||| || || || |||||||||||| |||||||||||||| |||||||||| |||||| Sbjct: 147 aattcaatattaataaaaagctactaacacaaaactcacatattcaatctcaacaatcta 206 Query: 180 tccagactaatacaactaaacaaaattcaacttctggaggtgcttacattaagaaagagg 239 |||| |||||||||||||||||||||||||||||| || ||||||||||||| ||| | Sbjct: 207 tccacactaatacaactaaacaaaattcaacttctagacgtgcttacattaacaaataaa 266 Query: 240 aaacctataacgatttagcttcgataatcagcaaaaaagaatgaattcagtcttgatatc 299 ||||||||||| ||||| |||| ||||||||||||||| ||| |||||| |||| ||||| Sbjct: 267 aaacctataaccatttatcttccataatcagcaaaaaataatcaattcactcttaatatc 326 Query: 300 tttctttggcatttttgtaagtcgaagtgtttggttcctgaaacgatttcatatgtaatt 359 ||||||| |||||||| ||| || || | ||| |||||| |||| || |||||| ||| Sbjct: 327 tttctttagcatttttctaattctaattttttcgttcctcaaaccatctcatatataaca 386 Query: 360 taaacaatat 369 |||||||||| Sbjct: 387 taaacaatat 396 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,583 Number of Sequences: 1807 Number of extensions: 13583 Number of successful extensions: 1285 Number of sequences better than 1.0e-20: 2 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)