BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC11ZG05FM1.SCF screened BAC_end
         (921 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1764                                                        1604   0.0  

>3x_Contig1764 
          Length = 22510

 Score = 1604 bits (809), Expect = 0.0
 Identities = 827/831 (99%), Gaps = 2/831 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   aacttgactttctgaaatttttcagattaagctatttgataacaaaaaattgccgagatg 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8149 aacttgactttctgaaatttttcagattaagctatttgataacaaaaaattgccgagatg 8090

                                                                        
Query: 148  agatgagctgagaggcatggaataaaagatacattatctgttaacaagagcatagcagac 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8089 agatgagctgagaggcatggaataaaagatacattatctgttaacaagagcatagcagac 8030

                                                                        
Query: 208  tcaaataaagtaaaaccattggtagtatagcatgctcagaaacatcacaagaagttattc 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8029 tcaaataaagtaaaaccattggtagtatagcatgctcagaaacatcacaagaagttattc 7970

                                                                        
Query: 268  gaacaagattcgttctgcggtcaaagtgcctaacgaatcgtatattaaggacagaaaagt 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7969 gaacaagattcgttctgcggtcaaagtgcctaacgaatcgtatattaaggacagaaaagt 7910

                                                                        
Query: 328  aacgttcgatcggaactttccagtgcataagaggactaaggcttgggagaaagatggaat 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7909 aacgttcgatcggaactttccagtgcataagaggactaaggcttgggagaaagatggaat 7850

                                                                        
Query: 388  ggataaagataaatggttcaggaaaaattacgcacatgttcatgcaagagaaaaaaatgc 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7849 ggataaagataaatggttcaggaaaaattacgcacatgttcatgcaagagaaaaaaatgc 7790

                                                                        
Query: 448  aaggctgaataacggaggaagtgacccattcgataagaagaaaaagtattacgatcggat 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7789 aaggctgaataacggaggaagtgacccattcgataagaagaaaaagtattacgatcggat 7730

                                                                        
Query: 508  caaacaagaagaatcgtccaaaagggaacagtttagaagtcataggtcagagtatactaa 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7729 caaacaagaagaatcgtccaaaagggaacagtttagaagtcataggtcagagtatactaa 7670

                                                                        
Query: 568  aatgcaccctttacaaggtttaaagcctaacccgttggttgattacgtttttggtaccaa 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7669 aatgcaccctttacaaggtttaaagcctaacccgttggttgattacgtttttggtaccaa 7610

                                                                        
Query: 628  cagtgtaattagtgccttaactgcgaagaagagagaatatttcgtaaagttgcatcatta 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7609 cagtgtaattagtgccttaactgcgaagaagagagaatatttcgtaaagttgcatcatta 7550

                                                                        
Query: 688  cggaccattgaatacacagattcaatcgttgtgttcgaaaaataatattcagactgaaga 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7549 cggaccattgaatacacagattcaatcgttgtgttcgaaaaataatattcagactgaaga 7490

                                                                        
Query: 748  ggtagataaacataggcttaatctatacactaattatgctgtgcataataatgtggttct 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7489 ggtagataaacataggcttaatctatacactaattatgctgtgcataataatgtggttct 7430

                                                                        
Query: 808  cgaatgtaaaccactccagcctnctgaattatctcatcttgggttggtaaaccatgaagc 867
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7429 cgaatgtaaaccactccagcctcctgaattatctcatcttgggttggtaaaccatgaagc 7370

                                                               
Query: 868  atgtacattctgac-agagcganattgattatgatcaagcagtaaacacta 917
            |||||||||| ||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 7369 atgtacattc-gacaagagcgaaattgattatgatcaagcagtaaacacta 7320


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6782
Number of Sequences: 1807
Number of extensions: 6782
Number of successful extensions: 156
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)