BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZG05FM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1764 1604 0.0 >3x_Contig1764 Length = 22510 Score = 1604 bits (809), Expect = 0.0 Identities = 827/831 (99%), Gaps = 2/831 (0%) Strand = Plus / Minus Query: 88 aacttgactttctgaaatttttcagattaagctatttgataacaaaaaattgccgagatg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8149 aacttgactttctgaaatttttcagattaagctatttgataacaaaaaattgccgagatg 8090 Query: 148 agatgagctgagaggcatggaataaaagatacattatctgttaacaagagcatagcagac 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8089 agatgagctgagaggcatggaataaaagatacattatctgttaacaagagcatagcagac 8030 Query: 208 tcaaataaagtaaaaccattggtagtatagcatgctcagaaacatcacaagaagttattc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8029 tcaaataaagtaaaaccattggtagtatagcatgctcagaaacatcacaagaagttattc 7970 Query: 268 gaacaagattcgttctgcggtcaaagtgcctaacgaatcgtatattaaggacagaaaagt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7969 gaacaagattcgttctgcggtcaaagtgcctaacgaatcgtatattaaggacagaaaagt 7910 Query: 328 aacgttcgatcggaactttccagtgcataagaggactaaggcttgggagaaagatggaat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7909 aacgttcgatcggaactttccagtgcataagaggactaaggcttgggagaaagatggaat 7850 Query: 388 ggataaagataaatggttcaggaaaaattacgcacatgttcatgcaagagaaaaaaatgc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7849 ggataaagataaatggttcaggaaaaattacgcacatgttcatgcaagagaaaaaaatgc 7790 Query: 448 aaggctgaataacggaggaagtgacccattcgataagaagaaaaagtattacgatcggat 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7789 aaggctgaataacggaggaagtgacccattcgataagaagaaaaagtattacgatcggat 7730 Query: 508 caaacaagaagaatcgtccaaaagggaacagtttagaagtcataggtcagagtatactaa 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7729 caaacaagaagaatcgtccaaaagggaacagtttagaagtcataggtcagagtatactaa 7670 Query: 568 aatgcaccctttacaaggtttaaagcctaacccgttggttgattacgtttttggtaccaa 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7669 aatgcaccctttacaaggtttaaagcctaacccgttggttgattacgtttttggtaccaa 7610 Query: 628 cagtgtaattagtgccttaactgcgaagaagagagaatatttcgtaaagttgcatcatta 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7609 cagtgtaattagtgccttaactgcgaagaagagagaatatttcgtaaagttgcatcatta 7550 Query: 688 cggaccattgaatacacagattcaatcgttgtgttcgaaaaataatattcagactgaaga 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7549 cggaccattgaatacacagattcaatcgttgtgttcgaaaaataatattcagactgaaga 7490 Query: 748 ggtagataaacataggcttaatctatacactaattatgctgtgcataataatgtggttct 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7489 ggtagataaacataggcttaatctatacactaattatgctgtgcataataatgtggttct 7430 Query: 808 cgaatgtaaaccactccagcctnctgaattatctcatcttgggttggtaaaccatgaagc 867 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 7429 cgaatgtaaaccactccagcctcctgaattatctcatcttgggttggtaaaccatgaagc 7370 Query: 868 atgtacattctgac-agagcganattgattatgatcaagcagtaaacacta 917 |||||||||| ||| ||||||| |||||||||||||||||||||||||||| Sbjct: 7369 atgtacattc-gacaagagcgaaattgattatgatcaagcagtaaacacta 7320 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6782 Number of Sequences: 1807 Number of extensions: 6782 Number of successful extensions: 156 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)