BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC11ZG08RM1.SCF screened BAC_end
         (917 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1639                                                        1683   0.0  

>3x_Contig1639 
          Length = 14140

 Score = 1683 bits (849), Expect = 0.0
 Identities = 862/865 (99%), Gaps = 1/865 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   ctaaaaccactcattagaaacgaaatatgagaacactccgagtatacgggaaaaccaaca 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8850 ctaaaaccactcattagaaacgaaatatgagaacactccgagtatacgggaaaaccaaca 8909

                                                                        
Query: 108  atgcatcagctgttttttgacccattcgtaaccatttttgtttctctaattgctttcaat 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8910 atgcatcagctgttttttgacccattcgtaaccatttttgtttctctaattgctttcaat 8969

                                                                        
Query: 168  acaaccattgatatgccaagaagccctcaaaacttagatattctcttattcccgaccgaa 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8970 acaaccattgatatgccaagaagccctcaaaacttagatattctcttattcccgaccgaa 9029

                                                                        
Query: 228  ttgttattttgagactacatgaatgaggctaatatcttatgctcatagtaaacttaacca 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9030 ttgttattttgagactacatgaatgaggctaatatcttatgctcatagtaaacttaacca 9089

                                                                        
Query: 288  actacccttaagttggccttaccttgtagttgagaaggagcatctggagaaataacatga 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9090 actacccttaagttggccttaccttgtagttgagaaggagcatctggagaaataacatga 9149

                                                                        
Query: 348  aaaaaaaacccttcttaacgggaaaatctggttggaatcatgagatctatgtagtataga 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9150 aaaaaaaacccttcttaacgggaaaatctggttggaatcatgagatctatgtagtataga 9209

                                                                        
Query: 408  atcagctgttttcgccagtccctgcctagcccatgagatatcgtaagaaattgatgcgta 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9210 atcagctgttttcgccagtccctgcctagcccatgagatatcgtaagaaattgatgcgta 9269

                                                                        
Query: 468  ccaagatggtaacgggtccgcactggaaaagtctcagtggagttaaagctgctgagtgat 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9270 ccaagatggtaacgggtccgcactggaaaagtctcagtggagttaaagctgctgagtgat 9329

                                                                        
Query: 528  aacagcacaacgctcccggatctaacctgtaaattctatatcatgccaaagttttttcga 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9330 aacagcacaacgctcccggatctaacctgtaaattctatatcatgccaaagttttttcga 9389

                                                                        
Query: 588  aaagattgggtgtacggattatcagttaaagggaaacgcacaaaattattttcacgtttt 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9390 aaagattgggtgtacggattatcagttaaagggaaacgcacaaaattattttcacgtttt 9449

                                                                        
Query: 648  gaggtacaatctgaaaagaccgttatgcatgtcaggggtaaattcaacgtacgggaaata 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9450 gaggtacaatctgaaaagaccgttatgcatgtcaggggtaaattcaacgtacgggaaata 9509

                                                                        
Query: 708  tgcagtaaagaaaaaggcaccagatgcacgaaggtaccattttgcttcgtgaaataacgc 767
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9510 tgcagtaaagaaaaaggcaccagatgcacgaaggtaccattttgcttcgtgaaataacgc 9569

                                                                        
Query: 768  aaacagtcgtacgcttctgcagaactgttcgtaaagtattttgaggcatatggctttggg 827
            |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 9570 aaacagtcgtacgcttctgcagaactgttcgtaaggtattttgaggcatatggc-ttggg 9628

                                                                        
Query: 828  ttgataacagatattgaataatcgaatagaagcagctaaagctgaccaggtctcagaagg 887
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 9629 ttgataacagatattgaataatcgaatagaagcagctaaagctgaccagttctcagaagg 9688

                                     
Query: 888  ttcaaagtgggaagggagaaaatga 912
            |||||||||||||||||||||||||
Sbjct: 9689 ttcaaagtgggaagggagaaaatga 9713


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6480
Number of Sequences: 1807
Number of extensions: 6480
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)