BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC11ZG08RM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1639 1683 0.0 >3x_Contig1639 Length = 14140 Score = 1683 bits (849), Expect = 0.0 Identities = 862/865 (99%), Gaps = 1/865 (0%) Strand = Plus / Plus Query: 48 ctaaaaccactcattagaaacgaaatatgagaacactccgagtatacgggaaaaccaaca 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8850 ctaaaaccactcattagaaacgaaatatgagaacactccgagtatacgggaaaaccaaca 8909 Query: 108 atgcatcagctgttttttgacccattcgtaaccatttttgtttctctaattgctttcaat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8910 atgcatcagctgttttttgacccattcgtaaccatttttgtttctctaattgctttcaat 8969 Query: 168 acaaccattgatatgccaagaagccctcaaaacttagatattctcttattcccgaccgaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8970 acaaccattgatatgccaagaagccctcaaaacttagatattctcttattcccgaccgaa 9029 Query: 228 ttgttattttgagactacatgaatgaggctaatatcttatgctcatagtaaacttaacca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9030 ttgttattttgagactacatgaatgaggctaatatcttatgctcatagtaaacttaacca 9089 Query: 288 actacccttaagttggccttaccttgtagttgagaaggagcatctggagaaataacatga 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9090 actacccttaagttggccttaccttgtagttgagaaggagcatctggagaaataacatga 9149 Query: 348 aaaaaaaacccttcttaacgggaaaatctggttggaatcatgagatctatgtagtataga 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9150 aaaaaaaacccttcttaacgggaaaatctggttggaatcatgagatctatgtagtataga 9209 Query: 408 atcagctgttttcgccagtccctgcctagcccatgagatatcgtaagaaattgatgcgta 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9210 atcagctgttttcgccagtccctgcctagcccatgagatatcgtaagaaattgatgcgta 9269 Query: 468 ccaagatggtaacgggtccgcactggaaaagtctcagtggagttaaagctgctgagtgat 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9270 ccaagatggtaacgggtccgcactggaaaagtctcagtggagttaaagctgctgagtgat 9329 Query: 528 aacagcacaacgctcccggatctaacctgtaaattctatatcatgccaaagttttttcga 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9330 aacagcacaacgctcccggatctaacctgtaaattctatatcatgccaaagttttttcga 9389 Query: 588 aaagattgggtgtacggattatcagttaaagggaaacgcacaaaattattttcacgtttt 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9390 aaagattgggtgtacggattatcagttaaagggaaacgcacaaaattattttcacgtttt 9449 Query: 648 gaggtacaatctgaaaagaccgttatgcatgtcaggggtaaattcaacgtacgggaaata 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9450 gaggtacaatctgaaaagaccgttatgcatgtcaggggtaaattcaacgtacgggaaata 9509 Query: 708 tgcagtaaagaaaaaggcaccagatgcacgaaggtaccattttgcttcgtgaaataacgc 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9510 tgcagtaaagaaaaaggcaccagatgcacgaaggtaccattttgcttcgtgaaataacgc 9569 Query: 768 aaacagtcgtacgcttctgcagaactgttcgtaaagtattttgaggcatatggctttggg 827 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 9570 aaacagtcgtacgcttctgcagaactgttcgtaaggtattttgaggcatatggc-ttggg 9628 Query: 828 ttgataacagatattgaataatcgaatagaagcagctaaagctgaccaggtctcagaagg 887 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9629 ttgataacagatattgaataatcgaatagaagcagctaaagctgaccagttctcagaagg 9688 Query: 888 ttcaaagtgggaagggagaaaatga 912 ||||||||||||||||||||||||| Sbjct: 9689 ttcaaagtgggaagggagaaaatga 9713 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6480 Number of Sequences: 1807 Number of extensions: 6480 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)