BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZA01RM1.SCF screened BAC_end
         (903 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1161                                                        1586   0.0  

>3x_Contig1161 
          Length = 5308

 Score = 1586 bits (800), Expect = 0.0
 Identities = 854/866 (98%), Gaps = 5/866 (0%)
 Strand = Plus / Plus

                                                                        
Query: 41   gctttgtttccgatactgttacttcgattagttccaacacaaattcgccaaggagtaatt 100
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1373 gctttgtttccgatactgttactccgattagttccaacacaaattcgccaaggagtaatt 1432

                                                                        
Query: 101  ctgtcaataataataaaattaacagaatcaacaacatgagggcacagaaacctaataatg 160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1433 ctgtcaataataataaaattaacagaatcaacaacatgagggcacagaaacctaataatg 1492

                                                                        
Query: 161  tgaggtttattttcaatcatgtaaattcatctccttttgctgttggtagtncttc-agna 219
            ||||||||| |||||||||||||||||||||||||||||||||||||||  |||| || |
Sbjct: 1493 tgaggtttagtttcaatcatgtaaattcatctccttttgctgttggtagctcttccagta 1552

                                                                        
Query: 220  ttgcagaagtctccatggattcgatgtttccaccctcgcccacgaagacaccaacgaaaa 279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 ttgcagaagtctccatggattcgatgtttccaccctcgcccacgaagacaccaacgaaaa 1612

                                                                        
Query: 280  tgttgccaaaaactaagagaaggaaatcctcgtcatcttcttcaagttcagtttcatctc 339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 tgttgccaaaaactaagagaaggaaatcctcgtcatcttcttcaagttcagtttcatctc 1672

                                                                        
Query: 340  taactcaagatcttttgtcgatgaaagatagaagatgcatctttaaaccagccccaaaga 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1673 taactcaagatcttttgtcgatgaaagatagaagatgcatctttaaaccagccccaaaga 1732

                                                                        
Query: 400  aaaaatcagagctttatctaaggccagaaagaagatgcccaaaattcgagtttggaattc 459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 aaaaatcagagctttatctaaggccagaaagaagatgcccaaaattcgagtttggaattc 1792

                                                                        
Query: 460  ggtcggaagataatgttatcaacgtaacgttccaaggtgggttcatcagaaataccatca 519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1793 ggtcggaagataatgttatcaacgtaacgttccaaggtgggttcatcagaaataccatca 1852

                                                                        
Query: 520  tggattggtatttccccagtgacagcgctcttccttctaattttcaagatgtgacaatcg 579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1853 tggattggtatttccccagtgacagcgctcttccttctaattttcaagatgtgacaatcg 1912

                                                                        
Query: 580  aatacgatcatgattattacgctaaaatgttgaaccatataaatacccaaatcgctatgc 639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1913 aatacgatcatgattattacgctaaaatgttgaaccatataaatacccaaatcgctatgc 1972

                                                                        
Query: 640  aaaatgaccccaacatttcaagtttcaggacatattggaaaatcttgaagtgtcaaactg 699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 aaaatgaccccaacatttcaagtttcaggacatattggaaaatcttgaagtgtcaaactg 2032

                                                                        
Query: 700  ggccacatatcaaattgcagttcatttctgaaacattagattgcgatgttaatttttcga 759
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 ggccacatatcaaattgcagttcatttctgaaacattagattgcgatgttaatttttcga 2092

                                                                        
Query: 760  acacccaatattattttaacattgtgtcgagaatcgtcagaccctaaaagttt-ggccca 818
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 2093 acacccaatattattttaacattgtgtcgagaatcgtcaga-cctaaaagtttcggccca 2151

                                                                        
Query: 819  atatgaaagcgg-gctaggtatagggccaagatggtgaatgacatgaaatcggacgatag 877
            ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2152 ata-gaaagcggtgctaggtatagggccaagatggtgaatgacatgaaatcggacgatag 2210

                                      
Query: 878  tactggcaagccgaaatgttgtcatt 903
            |||||||||||||| ||| |||||||
Sbjct: 2211 tactggcaagccgagatggtgtcatt 2236


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7797
Number of Sequences: 1807
Number of extensions: 7797
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)