BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZA01RM1.SCF screened BAC_end (903 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1161 1586 0.0 >3x_Contig1161 Length = 5308 Score = 1586 bits (800), Expect = 0.0 Identities = 854/866 (98%), Gaps = 5/866 (0%) Strand = Plus / Plus Query: 41 gctttgtttccgatactgttacttcgattagttccaacacaaattcgccaaggagtaatt 100 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1373 gctttgtttccgatactgttactccgattagttccaacacaaattcgccaaggagtaatt 1432 Query: 101 ctgtcaataataataaaattaacagaatcaacaacatgagggcacagaaacctaataatg 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1433 ctgtcaataataataaaattaacagaatcaacaacatgagggcacagaaacctaataatg 1492 Query: 161 tgaggtttattttcaatcatgtaaattcatctccttttgctgttggtagtncttc-agna 219 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| || | Sbjct: 1493 tgaggtttagtttcaatcatgtaaattcatctccttttgctgttggtagctcttccagta 1552 Query: 220 ttgcagaagtctccatggattcgatgtttccaccctcgcccacgaagacaccaacgaaaa 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1553 ttgcagaagtctccatggattcgatgtttccaccctcgcccacgaagacaccaacgaaaa 1612 Query: 280 tgttgccaaaaactaagagaaggaaatcctcgtcatcttcttcaagttcagtttcatctc 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1613 tgttgccaaaaactaagagaaggaaatcctcgtcatcttcttcaagttcagtttcatctc 1672 Query: 340 taactcaagatcttttgtcgatgaaagatagaagatgcatctttaaaccagccccaaaga 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1673 taactcaagatcttttgtcgatgaaagatagaagatgcatctttaaaccagccccaaaga 1732 Query: 400 aaaaatcagagctttatctaaggccagaaagaagatgcccaaaattcgagtttggaattc 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1733 aaaaatcagagctttatctaaggccagaaagaagatgcccaaaattcgagtttggaattc 1792 Query: 460 ggtcggaagataatgttatcaacgtaacgttccaaggtgggttcatcagaaataccatca 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1793 ggtcggaagataatgttatcaacgtaacgttccaaggtgggttcatcagaaataccatca 1852 Query: 520 tggattggtatttccccagtgacagcgctcttccttctaattttcaagatgtgacaatcg 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1853 tggattggtatttccccagtgacagcgctcttccttctaattttcaagatgtgacaatcg 1912 Query: 580 aatacgatcatgattattacgctaaaatgttgaaccatataaatacccaaatcgctatgc 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1913 aatacgatcatgattattacgctaaaatgttgaaccatataaatacccaaatcgctatgc 1972 Query: 640 aaaatgaccccaacatttcaagtttcaggacatattggaaaatcttgaagtgtcaaactg 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1973 aaaatgaccccaacatttcaagtttcaggacatattggaaaatcttgaagtgtcaaactg 2032 Query: 700 ggccacatatcaaattgcagttcatttctgaaacattagattgcgatgttaatttttcga 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2033 ggccacatatcaaattgcagttcatttctgaaacattagattgcgatgttaatttttcga 2092 Query: 760 acacccaatattattttaacattgtgtcgagaatcgtcagaccctaaaagttt-ggccca 818 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 2093 acacccaatattattttaacattgtgtcgagaatcgtcaga-cctaaaagtttcggccca 2151 Query: 819 atatgaaagcgg-gctaggtatagggccaagatggtgaatgacatgaaatcggacgatag 877 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2152 ata-gaaagcggtgctaggtatagggccaagatggtgaatgacatgaaatcggacgatag 2210 Query: 878 tactggcaagccgaaatgttgtcatt 903 |||||||||||||| ||| ||||||| Sbjct: 2211 tactggcaagccgagatggtgtcatt 2236 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7797 Number of Sequences: 1807 Number of extensions: 7797 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 903 length of database: 10,358,551 effective HSP length: 16 effective length of query: 887 effective length of database: 10,329,639 effective search space: 9162389793 effective search space used: 9162389793 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)