BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZA05FM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1758 1576 0.0 >3x_Contig1758 Length = 25930 Score = 1576 bits (795), Expect = 0.0 Identities = 818/823 (99%), Gaps = 2/823 (0%) Strand = Plus / Plus Query: 85 cactatcaagagtcagattctcatcattcatcagatcggcagatcccatagtacctcgtt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3626 cactatcaagagtcagattctcatcattcatcagatcggcagatcccatagtacctcgtt 3685 Query: 145 taggcttgaagtttttattgattattgtttgattccatatatccataatttgatcaaatg 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3686 taggcttgaagtttttattgattattgtttgattccatatatccataatttgatcaaatg 3745 Query: 205 tactgtcc-ttgttttgaaagatgcaaacaggaacttgtcatgtaaggtttgtatcgata 263 |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3746 tactgtcccttgatatgaaagatgcaaacaggaacttgtcatgtaaggtttgtatcgata 3805 Query: 264 tggcattaggaaataatacggcagtgttcttttgttcgatctgaactatctctttgaatg 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3806 tggcattaggaaataatacggcagtgttcttttgttcgatctgaactatctctttgaatg 3865 Query: 324 gaactacaacagtcttcatccatcccaaaatattcgagtaaaagcaaatgtgtctatcag 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3866 gaactacaacagtcttcatccatcccaaaatattcgagtaaaagcaaatgtgtctatcag 3925 Query: 384 atatgtataacctaccttgaatgagaatatcttttgataaagcacaactgtaatccgcta 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3926 atatgtataacctaccttgaatgagaatatcttttgataaagcacaactgtaatccgcta 3985 Query: 444 ttaatctttcaattggagatactacggtgtctttaaagattgtatggaaatctgtattac 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3986 ttaatctttcaattggagatactacggtgtctttaaagattgtatggaaatctgtattac 4045 Query: 504 gcttagcacttgcatattcaatgccttgaagttctggttcttcagtttttctctttattg 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4046 gcttagcacttgcatattcaatgccttgaagttctggttcttcagtttttctctttattg 4105 Query: 564 gaatgtccgaagttgacaggcgtgttggtcctccaggtggttgaacaatatcactggtct 623 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4106 gaatgtccgaagttgacaggcgtgttggtcctccaggtggttgaaaaatatcactggtct 4165 Query: 624 tggatatgctactcgctcttgtcatgtttctgcccgaaaatgaatttcttaggggtgctg 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4166 tggatatgctactcgctcttgtcatgtttctgcccgaaaatgaatttcttaggggtgctg 4225 Query: 684 taaataatttcgtagctgcagcaggcgacaatgatctcatagttaaatctctcaacactt 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4226 taaataatttcgtagctgcagcaggcgacaatgatctcatagttaaatctctcaacactt 4285 Query: 744 cggggcgtcttgacctaccgttcctcggcctagttttttcgaatgaaggactggcagaat 803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4286 cggggcgtcttgacctaccgttcctcggcctagttttttcgaatgaaggactggcagaat 4345 Query: 804 ttgtattgctgtccgtatttgcatcatcattaggcattgagagtggggacggagacgata 863 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4346 ttgtattgctgtccgtatttgcatcatcattaggcattgagagtggggacggagacgata 4405 Query: 864 ccggtcgatctggttgggtctgtggtaatcagcacacttggtg 906 ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4406 ccggtcgatctggtt-ggtctgtggtaatcagcacacttggtg 4447 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6294 Number of Sequences: 1807 Number of extensions: 6294 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)