BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZA05RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1758 1649 0.0 >3x_Contig1758 Length = 25930 Score = 1649 bits (832), Expect = 0.0 Identities = 858/863 (99%), Gaps = 3/863 (0%) Strand = Plus / Minus Query: 48 ctcgataagattttctctggtatgagtcgtaagtacgaattggtcttgtgaatattccgg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11965 ctcgataagattttctctggtatgagtcgtaagtacgaattggtcttgtgaatattccgg 11906 Query: 108 ccagtgagatttgataacctcatatatcgttctgacagtatcatgcattgcatcgaacct 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11905 ccagtgagatttgataacctcatatatcgttctgacagtatcatgcattgcatcgaacct 11846 Query: 168 tctcactagtcttttaccatcaccggatcgtacttgtattctggttgtgattccaggttt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11845 tctcactagtcttttaccatcaccggatcgtacttgtattctggttgtgattccaggttt 11786 Query: 228 gttatcaggttctgcatgttctattggtttgattgagtcgaagagtttccattgcgctcc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11785 gttatcaggttctgcatgttctattggtttgattgagtcgaagagtttccattgcgctcc 11726 Query: 288 gtcgggctcttcagtttcttcggtttcttccacttgatcagatttctcatttgtttcgtc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11725 gtcgggctcttcagtttcttcggtttcttccacttgatcagatttctcatttgtttcgtc 11666 Query: 348 cgaggtagtaggagtctggttgcctagcgattctcgtatggccaattcaagctgtttttc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11665 cgaggtagtaggagtctggttgcctagcgattctcgtatggccaattcaagctgtttttc 11606 Query: 408 ctcacttaaagtgctgggatcaatctttggagtgggttccttaacaggtggattagtagt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11605 ctcacttaaagtgctgggatcaatctttggagtgggttccttaacaggtggattagtagt 11546 Query: 468 agtgggatctaatgagaattcctctagaaatatctctagctcttgtctgaaattttccac 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11545 agtgggatctaatgagaattcctctagaaatatctctagctcttgtctgaaattttccac 11486 Query: 528 agttggcacttcacggctccaaaatttcaacctctccccggttattggatccaagatggc 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11485 agttggcacttcacggctccaaaatttcaacctctccccggttattggatccaagatggc 11426 Query: 588 gatatgaggacaatcttccttatcgttgaacccataacgttgtacataggcagatgctag 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11425 gatatgaggacaatcttccttatcgttgaacccataacgttgtacataggcagatgctag 11366 Query: 648 tcttgattcatattgatattgcagaaatatgaaattttgttttatgaaggattttatacc 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11365 tcttgattcatattgatattgcagaaatatgaaattttgttttatgaaggattttatacc 11306 Query: 708 tgcattggaccaaagatctctgttaagcatctggcactggaaaatatctgcacattggat 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11305 tgcattggaccaaagatctctgttaagcatctggcactggaaaatatctgcacattggat 11246 Query: 768 gttaatcattacccatttattccttttcttggctttttgccttgcagtgtcaagatcgta 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11245 gttaatcattacccatttattccttttcttggctttttgccttgcagtgtcaagatcgta 11186 Query: 828 tnttgccatttaatcgaatgggaggtctaaacaataatgctagccctggtttcctttgac 887 | |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 11185 ttttgccattaaatcgaat-ggaggtctaaacaataatgctag-cctggtttcctttgac 11128 Query: 888 attgggttttggcttcttaaccc 910 ||| ||||||||||||||||||| Sbjct: 11127 att-ggttttggcttcttaaccc 11106 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6112 Number of Sequences: 1807 Number of extensions: 6112 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)