BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZA09FM1.SCF screened BAC_end
         (918 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1498                                                        1590   0.0  

>3x_Contig1498 
          Length = 12634

 Score = 1590 bits (802), Expect = 0.0
 Identities = 825/830 (99%), Gaps = 2/830 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   tgcaacaggcagaggctttggatcagtatttgaaagagaatggttcaccagtgggtccat 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 tgcaacaggcagaggctttggatcagtatttgaaagagaatggttcaccagtgggtccat 1413

                                                                        
Query: 147  tgcatggtgtgccagtgtcgattaaggaacagatgtgctataagggtaaagtaacaaatg 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 tgcatggtgtgccagtgtcgattaaggaacagatgtgctataagggtaaagtaacaaatg 1473

                                                                        
Query: 207  cctcttacgtttcttacgtagattttgtgcctgaacagtctgcagtcagtgtggatatct 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 cctcttacgtttcttacgtagattttgtgcctgaacagtctgcagtcagtgtggatatct 1533

                                                                        
Query: 267  taattaaacttggtgctgtgtgccatgttagaacttcgcaacctcaaaccattatgcatc 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 taattaaacttggtgctgtgtgccatgttagaacttcgcaacctcaaaccattatgcatc 1593

                                                                        
Query: 327  tagacacttggaacaattacattggcagaacaagaaaccctcgttccacgaaattgtccc 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 tagacacttggaacaattacattggcagaacaagaaaccctcgttccacgaaattgtccc 1653

                                                                        
Query: 387  caggtggttcctccggtggcgaatcagcctgtgtcggtatgcatggttctgtcattggcc 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 caggtggttcctccggtggcgaatcagcctgtgtcggtatgcatggttctgtcattggcc 1713

                                                                        
Query: 447  atgggtccgatattggtggttccattagagcaccagctgcattcgccaatttgttcggtc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 atgggtccgatattggtggttccattagagcaccagctgcattcgccaatttgttcggtc 1773

                                                                        
Query: 507  ttagaccaacgactaaacgtgtatcattgctcaatggtatcagtggagggaaaggccaag 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 ttagaccaacgactaaacgtgtatcattgctcaatggtatcagtggagggaaaggccaag 1833

                                                                        
Query: 567  aatctgtcgttgctgttcaaggccccttggcaagatctatcgatgaattggattattaca 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 aatctgtcgttgctgttcaaggccccttggcaagatctatcgatgaattggattattaca 1893

                                                                        
Query: 627  tgaaatcatatttgaatgagggtaaaccttgggaaactgatccatcactggtcccaatcc 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 tgaaatcatatttgaatgagggtaaaccttgggaaactgatccatcactggtcccaatcc 1953

                                                                        
Query: 687  catggaggaaatcctctttaccagatgtcatcaatatcggtatattaccatccgatggcc 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 catggaggaaatcctctttaccagatgtcatcaatatcggtatattaccatccgatggcc 2013

                                                                        
Query: 747  ttgtgactccatacccatctattaccagaggtgtcaaacatgttgccgatgtattatcca 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 ttgtgactccatacccatctattaccagaggtgtcaaacatgttgccgatgtattatcca 2073

                                                                        
Query: 807  aggatccaagattcaatgtgatagatctatcttgacaatggttctctgaagaagaaatga 866
            ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 2074 aggatccaagattcaatgtgatagatctatctgaacaatggttctctgaagaagaaatga 2133

                                                              
Query: 867  a-gaattgtatgatactacttttgcctttatatacatgtgatggtaacaa 915
            | ||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 2134 aggaattgtatgatactac-tttgtctttatatacatgtgatggtaacaa 2182


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5873
Number of Sequences: 1807
Number of extensions: 5873
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)