BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZA11FM1.SCF screened BAC_end
         (907 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig969                                                          872   0.0  

>3x_Contig969 
          Length = 3546

 Score =  872 bits (440), Expect = 0.0
 Identities = 449/452 (99%)
 Strand = Plus / Minus

                                                                        
Query: 455  tctcttgtcacagatagcagaaacaccacaaacagtcaatcttgcagctcttgttccgac 514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3510 tctcttgtcacagatagcagaaacaccacaaacagtcaatcttgcagctcttgttccgac 3451

                                                                        
Query: 515  caattcggctaattttctaatcaactttctctcaacaacggtagtttcgatgttcaagtt 574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3450 caattcggctaattttctaatcaactttctctcaacaacggtagtttcgatgttcaagtt 3391

                                                                        
Query: 575  agtcttgaacagatcgtcagtgtcttccaagttttcgaatggatcatcttcgatcttaga 634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3390 agtcttgaacagatcgtcagtgtcttccaagttttcgaatggatcatcttcgatcttaga 3331

                                                                        
Query: 635  tggataactggtgtccatgacgtaagcctctttcaacttggagatatcttggtccttaaa 694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3330 tggataactggtgtccatgacgtaagcctctttcaacttggagatatcttggtccttaaa 3271

                                                                        
Query: 695  gatgaaaccactgtcgtacaagtccaatagtactagacgcatgatttcacctagatagta 754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3270 gatgaaaccactgtcgtacaagtccaatagtactagacgcatgatttcacctagatagta 3211

                                                                        
Query: 755  accagaagtcatcttttcgaaagcttgttgacctggtcttggagattcttcatcgattat 814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3210 accagaagtcatcttttcgaaagcttgttgacctggtcttggagattcttcatcgattat 3151

                                                                        
Query: 815  aacatcgtatttggttctttggcacaccaaatgttcgttatcgaaggaaccatattcaca 874
            ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||
Sbjct: 3150 aacatcgtatttggttcttggcaacaccaaatgttcgttatcgaaggaaccatattcaca 3091

                                            
Query: 875  gttgattgccattggagaatctggaccgatat 906
            ||||||||||||||||||||||||||||||||
Sbjct: 3090 gttgattgccattggagaatctggaccgatat 3059


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7200
Number of Sequences: 1807
Number of extensions: 7200
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)