BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZB02RM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig540 1513 0.0 3x_Contig1109 170 3e-42 >3x_Contig540 Length = 1644 Score = 1513 bits (763), Expect = 0.0 Identities = 869/898 (96%), Gaps = 5/898 (0%) Strand = Plus / Minus Query: 48 gcttcagagacttttttagttttatttcaatctcaattgcatacgatgaactcgtatgca 107 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 898 gcttcagagacttttttagttttatttcaatctcaattgcatacgaggaactcgtatgca 839 Query: 108 attggaacctatactctaaaatctgtcactcatactctcttatatactatggcaaaaaaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 attggaacctatactctaaaatctgtcactcatactctcttatatactatggcaaaaaaa 779 Query: 168 aggatttttttgaaaagtactgctgtattgaaattcaactgaatatttatg-agctacnc 226 |||| ||||||||||| |||||||||||||||||||||||||||||| ||| || | Sbjct: 778 aggagcaccttgaaaagtacagctgtattgaaattcaactgaatatttatgtagcaactc 719 Query: 227 atctaatatagtcatttggttcccactgacgatgatgttgccaaatatgccatggtattt 286 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 agctaatatagtcatttggttcccactgacgatgatgttgccaaatatgccatggtattt 659 Query: 287 gatttatattacctaaactgttatatggtttattatactgaagtaatgcagccgatacaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gatttatattacctaaactgttatatggtttattatactgaagtaatgcagccgatacaa 599 Query: 347 aaaaataaaaaaagaaactcggtcagaggctgagaaaaccagattcaattcactgctgtg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 aaaaataaaaaaagaaactcggtcagaggctgagaaaaccagattcaattcactgctgtg 539 Query: 407 ttcaataatgttgatgagctgagctgagttcaaatgacaattttaagattctaaggcatt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 ttcaataatgttgatgagctgagctgagttcaaatgacaattttaagattctaaggcatt 479 Query: 467 tcttcactgttaaaagcctctgcattttgagccaaaaagaatccacaaagtcaccgactt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 tcttcactgttaaaagcctctgcattttgagccaaaaagaatccacaaagtcaccgactt 419 Query: 527 ttgatggtggaatgttctagatatccactcgtgaaagcaacattattctacgttcacgat 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 ttgatggtggaatgttctagatatccactcgtgaaagcaacattattctacgttcacgat 359 Query: 587 tttgtttttggtgtttatggttttaattctaatataaacgaattgacgcttctaagctgt 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 tttgtttttggtgtttatggttttaattctaatataaacgaattgacgcttctaagctgt 299 Query: 647 gcttaaatttctatgcagtataaatggaaaaaatttactttttcataaagattggagggt 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 gcttaaatttctatgcagtataaatggaaaaaatttactttttcataaagattggagggt 239 Query: 707 tggccgagtggtctaaggcggcagacttaagatctgttggacaattgtccgcgcgagttc 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 tggccgagtggtctaaggcggcagacttaagatctgttggacaattgtccgcgcgagttc 179 Query: 767 gaacctcgcattcttcattactttttac-ttttttttcaaatccagattt-atactcatg 824 ||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 178 gaacctcgcatccttcattactttttactttttttttcaaatccagatttaatactcatg 119 Query: 825 ttttacaaagcctaatattaagccttt-tctgctgatgattggcatgcgcttcaagcaca 883 ||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 118 tttaacatagcctaatattaagcctttctctgctgatgattcgcatgcgcttcaagcaca 59 Query: 884 agatatgtggtttactattaacagccaat-aatgttaaaggcaaatatgagttatctg 940 ||| | || ||||||||| |||| | || |||||||| | |||||||||||||||| Sbjct: 58 agacttttgttttactatttacagtctataaatgttaatgttaaatatgagttatctg 1 >3x_Contig1109 Length = 3474 Score = 170 bits (86), Expect = 3e-42 Identities = 92/94 (97%) Strand = Plus / Minus Query: 699 tggagggttggccgagtggtctaaggcggcagacttaagatctgttggacaattgtccgc 758 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 422 tggagggttggccgagtggtctaaggcggcagacttaagatctgttggacgattgtccgc 363 Query: 759 gcgagttcgaacctcgcattcttcattacttttt 792 ||||||||||||||||||| |||||||||||||| Sbjct: 362 gcgagttcgaacctcgcatccttcattacttttt 329 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9248 Number of Sequences: 1807 Number of extensions: 9248 Number of successful extensions: 156 Number of sequences better than 1.0e-20: 2 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)