BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZB08FM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1389                                                        1554   0.0  

>3x_Contig1389 
          Length = 7926

 Score = 1554 bits (784), Expect = 0.0
 Identities = 836/850 (98%), Gaps = 3/850 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   cttcaaataataaaggacttctttagacgatagttcctgcgctccgagcacttgagtcaa 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5909 cttcaaataataaaggacttctttagacgatagttcctgcgctccgagcacttgagtcaa 5850

                                                                        
Query: 146  aattggatttcttgacacggcttcctcgcttgtctccaacatctctttagtatccaaaga 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5849 aattggatttcttgacacggcttcctcgcttgtctccaacatctctttagtatccaaaga 5790

                                                                        
Query: 206  atcttttattttcttttcctttagtctgttcttatcgaaactaggaggtttcgattcggc 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5789 atcttttattttcttttcctttagtctgttcttatcgaaactaggaggtttcgattcggc 5730

                                                                        
Query: 266  acttctctcaccctcatttacctcagtttcatcatcacggaactctttcacggagagctt 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5729 acttctctcaccctcatttacctcagtttcatcatcacggaactctttcacggagagctt 5670

                                                                        
Query: 326  agctgatgttgtattcttaaactcattcaatctttgctgaagcgtttcctctgcaacatg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5669 agctgatgttgtattcttaaactcattcaatctttgctgaagcgtttcctctgcaacatg 5610

                                                                        
Query: 386  agatattgccacgatttcagaatgcgttcttctcaaattgttcattctacaggcaagtaa 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5609 agatattgccacgatttcagaatgcgttcttctcaaattgttcattctacaggcaagtaa 5550

                                                                        
Query: 446  gagacatgcacctgcgataccagctggtcttctcccttcatacatccaatctctggacat 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5549 gagacatgcacctgcgataccagctggtcttctcccttcatacatccaatctctggacat 5490

                                                                        
Query: 506  agtttgtgccagtttcacagcgtcccttatcactttaatctttttatcaccaagctccaa 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5489 agtttgtgccagtttcacagcgtcccttatcactttaatctttttatcaccaagctccaa 5430

                                                                        
Query: 566  tttctccgcgaaatgttgaatgaacaaagatgggtcagctagaggtaacttaactatttg 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5429 tttctccgcgaaatgttgaatgaacaaagatgggtcagctagaggtaacttaactatttg 5370

                                                                        
Query: 626  taacttcttcgctagcttcaaaaatgtggcaccaatagaataaacactcacttgtaacct 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5369 taacttcttcgctagcttcaaaaatgtggcaccaatagaataaacactcacttgtaacct 5310

                                                                        
Query: 686  tgatgaaaagtcaataagcatgtgatgagtacgttctttacgacatgcgatgtacaaaca 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5309 tgatgaaaagtcaataagcatgtgatgagtacgttctttacgacatgcgatgtacaaaca 5250

                                                                        
Query: 746  agcggcaatcacattttgtgatttcctaccttgaac-aaattattactcanagccaatct 804
            |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 5249 agcggcaatcacattttgtgatttcctaccttgaacaaaattattactcaaagccaatct 5190

                                                                        
Query: 805  ataccatttggaagcagcatcagttacatattcgggaatattt-acgcataggagacagc 863
            |||||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 5189 ataccattggaaagcagcatcagtaacatattcgggaatatttaacgcataggagacagc 5130

                                                                        
Query: 864  ttttcacttccgnctagcgttgttc-aagtagtttctctggacaatcaagcattctgacc 922
            |||  ||||||| |||||||||||| ||||||||||||||||||   |||||||||||||
Sbjct: 5129 tttcaacttccgcctagcgttgttcaaagtagtttctctggacatcaaagcattctgacc 5070

                      
Query: 923  gggatgtgac 932
            || |||||||
Sbjct: 5069 ggaatgtgac 5060


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6238
Number of Sequences: 1807
Number of extensions: 6238
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)