BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZB08FM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1389 1554 0.0 >3x_Contig1389 Length = 7926 Score = 1554 bits (784), Expect = 0.0 Identities = 836/850 (98%), Gaps = 3/850 (0%) Strand = Plus / Minus Query: 86 cttcaaataataaaggacttctttagacgatagttcctgcgctccgagcacttgagtcaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5909 cttcaaataataaaggacttctttagacgatagttcctgcgctccgagcacttgagtcaa 5850 Query: 146 aattggatttcttgacacggcttcctcgcttgtctccaacatctctttagtatccaaaga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5849 aattggatttcttgacacggcttcctcgcttgtctccaacatctctttagtatccaaaga 5790 Query: 206 atcttttattttcttttcctttagtctgttcttatcgaaactaggaggtttcgattcggc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5789 atcttttattttcttttcctttagtctgttcttatcgaaactaggaggtttcgattcggc 5730 Query: 266 acttctctcaccctcatttacctcagtttcatcatcacggaactctttcacggagagctt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5729 acttctctcaccctcatttacctcagtttcatcatcacggaactctttcacggagagctt 5670 Query: 326 agctgatgttgtattcttaaactcattcaatctttgctgaagcgtttcctctgcaacatg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5669 agctgatgttgtattcttaaactcattcaatctttgctgaagcgtttcctctgcaacatg 5610 Query: 386 agatattgccacgatttcagaatgcgttcttctcaaattgttcattctacaggcaagtaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5609 agatattgccacgatttcagaatgcgttcttctcaaattgttcattctacaggcaagtaa 5550 Query: 446 gagacatgcacctgcgataccagctggtcttctcccttcatacatccaatctctggacat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5549 gagacatgcacctgcgataccagctggtcttctcccttcatacatccaatctctggacat 5490 Query: 506 agtttgtgccagtttcacagcgtcccttatcactttaatctttttatcaccaagctccaa 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5489 agtttgtgccagtttcacagcgtcccttatcactttaatctttttatcaccaagctccaa 5430 Query: 566 tttctccgcgaaatgttgaatgaacaaagatgggtcagctagaggtaacttaactatttg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5429 tttctccgcgaaatgttgaatgaacaaagatgggtcagctagaggtaacttaactatttg 5370 Query: 626 taacttcttcgctagcttcaaaaatgtggcaccaatagaataaacactcacttgtaacct 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5369 taacttcttcgctagcttcaaaaatgtggcaccaatagaataaacactcacttgtaacct 5310 Query: 686 tgatgaaaagtcaataagcatgtgatgagtacgttctttacgacatgcgatgtacaaaca 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5309 tgatgaaaagtcaataagcatgtgatgagtacgttctttacgacatgcgatgtacaaaca 5250 Query: 746 agcggcaatcacattttgtgatttcctaccttgaac-aaattattactcanagccaatct 804 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 5249 agcggcaatcacattttgtgatttcctaccttgaacaaaattattactcaaagccaatct 5190 Query: 805 ataccatttggaagcagcatcagttacatattcgggaatattt-acgcataggagacagc 863 |||||||| | ||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 5189 ataccattggaaagcagcatcagtaacatattcgggaatatttaacgcataggagacagc 5130 Query: 864 ttttcacttccgnctagcgttgttc-aagtagtttctctggacaatcaagcattctgacc 922 ||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 5129 tttcaacttccgcctagcgttgttcaaagtagtttctctggacatcaaagcattctgacc 5070 Query: 923 gggatgtgac 932 || ||||||| Sbjct: 5069 ggaatgtgac 5060 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6238 Number of Sequences: 1807 Number of extensions: 6238 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)