BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZB08RM1.SCF screened BAC_end
         (946 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1611                                                        1532   0.0  

>3x_Contig1611 
          Length = 15286

 Score = 1532 bits (773), Expect = 0.0
 Identities = 827/841 (98%), Gaps = 3/841 (0%)
 Strand = Plus / Plus

                                                                        
Query: 53   cttgacaaatagtcaccgatattttattgataaaaatgagagtgctacaggacttacttt 112
            ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 3519 cttgacaaatagtcaccgatatcgtattgataaaaatgagagtgctacaggacttacttt 3578

                                                                        
Query: 113  ggctcgttacaaccttctaaatctctttcttccagaagtccttattgaagctgaattctc 172
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3579 ggctcgttacaaccttctaaatctctttcttccagaagtccttattgaagctgaattctc 3638

                                                                        
Query: 173  accgcaaaaatctggagaaaaattacagcttcctgttaaaagatctcttgtgggtttcag 232
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 3639 accgcaaaaatctggagaaaaattacagcttcctgttaaaagatctcttgggggttacag 3698

                                                                        
Query: 233  caggggtcgtaggctcattgtagagctttccgaaccgaaatggacgactcatgcggccag 292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3699 caggggtcgtaggctcattgtagagctttccgaaccgaaatggacgactcatgcggccag 3758

                                                                        
Query: 293  aataccaactcttaatgacagctttaatgaaaaccagaaaatggcgattgaacgttcgct 352
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3759 aataccaactcttaatgacagctttaatgaaaaccagaaaatggcgattgaacgttcgct 3818

                                                                        
Query: 353  cacctgccgtgactacaacttgattttaggaatgcctggaactggtaagacatcagttat 412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3819 cacctgccgtgactacaacttgattttaggaatgcctggaactggtaagacatcagttat 3878

                                                                        
Query: 413  ttgtgaattagtttcaatattggtaaatcagggaaaatctgtcatggtgacaagctacac 472
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3879 ttgtgaattagtttcaatattggtaaatcagggaaaatctgtcatggtgacaagctacac 3938

                                                                        
Query: 473  caattcagctgtcgataatattataatgaagctaacttcgcgtatccctcgctctaagat 532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3939 caattcagctgtcgataatattataatgaagctaacttcgcgtatccctcgctctaagat 3998

                                                                        
Query: 533  ggtacgtttgggatctggacgtcgagtccatgatttggtcaaaccatattgcataacaga 592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3999 ggtacgtttgggatctggacgtcgagtccatgatttggtcaaaccatattgcataacaga 4058

                                                                        
Query: 593  gatgttagatggtgataacgagaacttgtcggaaataatcgatgcagcacaagtggtcgg 652
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4059 gatgttagatggtgataacgagaacttgtcggaaataatcgatgcagcacaagtggtcgg 4118

                                                                        
Query: 653  tgtaacgtgtctcggtattaatgatccgtggttacaaatgcgaaatggtgattttgatta 712
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4119 tgtaacgtgtctcggtattaatgatccgtggttacaaatgcgaaatggtgattttgatta 4178

                                                                        
Query: 713  tgttatattagatgaagccagtcaagtttcgctacctgtcgccattggtccattaagggt 772
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4179 tgttatattagatgaagccagtcaagtttcgctacctgtcgccattggtccattaaggtt 4238

                                                                        
Query: 773  cggatataagttcatattaagtc-gagaccattatcaattaccgcccttattgaagaact 831
            |||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||||||
Sbjct: 4239 cggatataagttcatatt-agtcggagaccattatcaattaccgccattagtgaagaact 4297

                                                                        
Query: 832  catttgcccctgacattggtctacaagaatccttattcgaaaaa-tgtgtcattcgcatc 890
            ||||||| | ||||| ||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 4298 catttgcacgtgacaatggtctacaagaatcgttattcgaaaaattgtgtcattcgcatc 4357

             
Query: 891  c 891
            |
Sbjct: 4358 c 4358


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6046
Number of Sequences: 1807
Number of extensions: 6046
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)