BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZB08RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1611 1532 0.0 >3x_Contig1611 Length = 15286 Score = 1532 bits (773), Expect = 0.0 Identities = 827/841 (98%), Gaps = 3/841 (0%) Strand = Plus / Plus Query: 53 cttgacaaatagtcaccgatattttattgataaaaatgagagtgctacaggacttacttt 112 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3519 cttgacaaatagtcaccgatatcgtattgataaaaatgagagtgctacaggacttacttt 3578 Query: 113 ggctcgttacaaccttctaaatctctttcttccagaagtccttattgaagctgaattctc 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3579 ggctcgttacaaccttctaaatctctttcttccagaagtccttattgaagctgaattctc 3638 Query: 173 accgcaaaaatctggagaaaaattacagcttcctgttaaaagatctcttgtgggtttcag 232 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 3639 accgcaaaaatctggagaaaaattacagcttcctgttaaaagatctcttgggggttacag 3698 Query: 233 caggggtcgtaggctcattgtagagctttccgaaccgaaatggacgactcatgcggccag 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3699 caggggtcgtaggctcattgtagagctttccgaaccgaaatggacgactcatgcggccag 3758 Query: 293 aataccaactcttaatgacagctttaatgaaaaccagaaaatggcgattgaacgttcgct 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3759 aataccaactcttaatgacagctttaatgaaaaccagaaaatggcgattgaacgttcgct 3818 Query: 353 cacctgccgtgactacaacttgattttaggaatgcctggaactggtaagacatcagttat 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3819 cacctgccgtgactacaacttgattttaggaatgcctggaactggtaagacatcagttat 3878 Query: 413 ttgtgaattagtttcaatattggtaaatcagggaaaatctgtcatggtgacaagctacac 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3879 ttgtgaattagtttcaatattggtaaatcagggaaaatctgtcatggtgacaagctacac 3938 Query: 473 caattcagctgtcgataatattataatgaagctaacttcgcgtatccctcgctctaagat 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3939 caattcagctgtcgataatattataatgaagctaacttcgcgtatccctcgctctaagat 3998 Query: 533 ggtacgtttgggatctggacgtcgagtccatgatttggtcaaaccatattgcataacaga 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3999 ggtacgtttgggatctggacgtcgagtccatgatttggtcaaaccatattgcataacaga 4058 Query: 593 gatgttagatggtgataacgagaacttgtcggaaataatcgatgcagcacaagtggtcgg 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4059 gatgttagatggtgataacgagaacttgtcggaaataatcgatgcagcacaagtggtcgg 4118 Query: 653 tgtaacgtgtctcggtattaatgatccgtggttacaaatgcgaaatggtgattttgatta 712 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4119 tgtaacgtgtctcggtattaatgatccgtggttacaaatgcgaaatggtgattttgatta 4178 Query: 713 tgttatattagatgaagccagtcaagtttcgctacctgtcgccattggtccattaagggt 772 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4179 tgttatattagatgaagccagtcaagtttcgctacctgtcgccattggtccattaaggtt 4238 Query: 773 cggatataagttcatattaagtc-gagaccattatcaattaccgcccttattgaagaact 831 |||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 4239 cggatataagttcatatt-agtcggagaccattatcaattaccgccattagtgaagaact 4297 Query: 832 catttgcccctgacattggtctacaagaatccttattcgaaaaa-tgtgtcattcgcatc 890 ||||||| | ||||| ||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 4298 catttgcacgtgacaatggtctacaagaatcgttattcgaaaaattgtgtcattcgcatc 4357 Query: 891 c 891 | Sbjct: 4358 c 4358 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6046 Number of Sequences: 1807 Number of extensions: 6046 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)