BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZB10RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1385 1631 0.0 >3x_Contig1385 Length = 5361 Score = 1631 bits (823), Expect = 0.0 Identities = 861/871 (98%), Gaps = 2/871 (0%) Strand = Plus / Minus Query: 42 gcttatgaaggtgtagaatctgtttaatttagcaacagatactttagaaaagatattgct 101 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3922 gcttatgaaggtgtagaatctgttcaatttagcaacagatactttagaaaagatattgct 3863 Query: 102 catcgcgccttcaagaattcagctgcctctgctggaaagtcaatcacctatgccgaagca 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3862 catcgcgccttcaagaattcagctgcctctgctggaaagtcaatcacctatgccgaagca 3803 Query: 162 ggtgtttccgtcgataacggaaatcttttagtgcaaaagattaaagctacagttattttt 221 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 3802 ggtgtttccgtcgataacggaaatcttttagtgcaaaagattaaagctacagttaagtct 3743 Query: 222 accagcagacctggtactgactctgatatcggtggttttggtggtttgtttgacttgaaa 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3742 accagcagacctggtactgactctgatatcggtggttttggtggtttgtttgacttgaaa 3683 Query: 282 gccgctggttacaatactgatgaaaccttattggtcgctgcaaccgatggtgttggtaca 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3682 gccgctggttacaatactgatgaaaccttattggtcgctgcaaccgatggtgttggtaca 3623 Query: 342 aagctaatgattgctcaagaaactgacatacacaacaccgtcggtattgacttggttgcc 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3622 aagctaatgattgctcaagaaactgacatacacaacaccgtcggtattgacttggttgcc 3563 Query: 402 atgaatgttaacgatttggtcgtccaaggtgcagagcctctattattcttggattacttt 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3562 atgaatgttaacgatttggtcgtccaaggtgcagagcctctattattcttggattacttt 3503 Query: 462 gctactggtgctttggatatcaaggttgcatcggactttgtctccggtgttgccactggc 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3502 gctactggtgctttggatatcaaggttgcatcggactttgtctccggtgttgccactggc 3443 Query: 522 tgtatccaagctggttgtgcattggttggtggtgaaacctcagaaatgccaggtatgtac 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3442 tgtatccaagctggttgtgcattggttggtggtgaaacctcagaaatgccaggtatgtac 3383 Query: 582 ccaccaggtcactacgatacaaacggtaccgctgtaggcgccgttaacaaaactcaaatt 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3382 ccaccaggtcactacgatacaaacggtaccgctgtaggcgccgttaacaaaactcaaatt 3323 Query: 642 ctaccaaaagtagaagaaatgggttctggaaatgtccttttggggttgtcatctgatggt 701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3322 ctaccaaaagtagaagaaatgggttctggaaatgtccttttggggttgtcatctgatggt 3263 Query: 702 gttcattcgaatgggctctccttggttagaaaaatcattgaacacactggtctaccgtgg 761 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3262 gttcattcgaatgggctctccttggttagaaaaatcattgaacacactggtctaccgtgg 3203 Query: 762 gaagctgaatgtccatgggatgcttcaaagactctaggtgaagctattcttgtgccaaca 821 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3202 gaagctgaatgtccatgggatgcttcaaagactctaggtgaagctattcttgtgccaaca 3143 Query: 822 agaatatacgttgaacaattattaccttcgatcaaagagc-actactattaggtttagct 880 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3142 agaatatacgtgaaacaattattaccttcgatcaaagagcaactactattaggtttagct 3083 Query: 881 catatcactggtggggggtttagctgaaaac 911 |||||||||||| || ||||||| ||||||| Sbjct: 3082 catatcactggt-ggtggtttagttgaaaac 3053 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5728 Number of Sequences: 1807 Number of extensions: 5728 Number of successful extensions: 27 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)