BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZC08FM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1646 1118 0.0 3x_Contig1223 494 e-139 >3x_Contig1646 Length = 14145 Score = 1118 bits (564), Expect = 0.0 Identities = 595/602 (98%), Gaps = 3/602 (0%) Strand = Plus / Plus Query: 332 gttggcataagaacgaacgcatccttaccctgtaaagtggcattaactgcttccaattga 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gttggcataagaacgaacgcatccttaccctgtaaagtggcattaactgcttccaattga 60 Query: 392 tttggtctaaatgaatcaagtccaaag-acatgccgtaatttgtggtacatttctgatgt 450 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 61 tttggtctaaatgaatcaagtccaaagcacatgccgtaatttgtggtacatttctgatgt 120 Query: 451 ccatgcatattgaggttgtactgaattctctctcgtacacttctcggtttcctccatata 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccatgcatattgaggttgtactgaattctctctcgtacacttctcggtttcctccatata 180 Query: 511 gggttccaggtctgccatggaaaagtcatcatcttcaataacttctggcactggcaccag 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggttccaggtctgccatggaaaagtcatcatcttcaataacttctggcactggcaccag 240 Query: 571 ttcagtttgtaattgcgtgtcaaggcttttcggttccttcttgatagcgaatgataaggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttcagtttgtaattgcgtgtcaaggcttttcggttccttcttgatagcgaatgataaggg 300 Query: 631 cacatcttcggcatctaatttcgcctctgaaatgattttcaagtcgtcatccagttcctt 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacatcttcggcatctaatttcgcctctgaaatgattttcaagtcgtcatccagttcctt 360 Query: 691 aatttcatcaaactgcgtttggtcttctcgttcagcatcaaactcctccagatctgtatc 750 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aatttcatcaaactgcgtttggtcttctcgttcagcatcaaactcctccagatctgtatc 420 Query: 751 tgacagtggttcaaactcctcggagtgcactgcaacggtatgatcctgcngcagagactc 810 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 421 tgacagtggttcaaactcctcggagtgcactgcaacggtatgatcctgcggcagagactc 480 Query: 811 tgaaatggggtctttcangaa-tctacatcatcatcgtccaataatctcaattgcggagt 869 |||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 481 tgaaatggggtcttccaggaattctacatcatcatcgtccaataatctcaattgcggagt 540 Query: 870 aagcttggaattcctgacttgtattctgagtttgctgttgtaatggaggttgagacggtg 929 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 aggc-tggaattcctgacttgtattctgagtttgctgttgtaatggaggttgagacggtg 599 Query: 930 gg 931 || Sbjct: 600 gg 601 >3x_Contig1223 Length = 4555 Score = 494 bits (249), Expect = e-139 Identities = 249/249 (100%) Strand = Plus / Plus Query: 87 taatcatttctggagaaatataaaccaattctagtaatccattcatgaacaaattgaaag 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4302 taatcatttctggagaaatataaaccaattctagtaatccattcatgaacaaattgaaag 4361 Query: 147 tcattcttctttgttcggctgttcctttagaactgaacatactagctttgatatcttttg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4362 tcattcttctttgttcggctgttcctttagaactgaacatactagctttgatatcttttg 4421 Query: 207 ccaaaagatgctcaacctgatcctgcatcaaagaaatcaaaggagagacaacgatcgtgg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4422 ccaaaagatgctcaacctgatcctgcatcaaagaaatcaaaggagagacaacgatcgtgg 4481 Query: 267 tcccagatgtccttcctgatttcacaatagccggaagttggtaacagagtgacttaccac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4482 tcccagatgtccttcctgatttcacaatagccggaagttggtaacagagtgacttaccac 4541 Query: 327 cacctgttg 335 ||||||||| Sbjct: 4542 cacctgttg 4550 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6425 Number of Sequences: 1807 Number of extensions: 6425 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 2 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)