BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZC09RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig948 1542 0.0 >3x_Contig948 Length = 3578 Score = 1542 bits (778), Expect = 0.0 Identities = 877/899 (97%), Gaps = 10/899 (1%) Strand = Plus / Minus Query: 43 cttgatagaaacttcctcctgaattttgactctgaagtcaccagaaccatttaaattcgg 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1075 cttgatagaaacttcctcctgaattttgactctgaagtcaccagaaccatttaaattcgg 1016 Query: 103 tacaaggtttggtccgcataatttcgtctcgacgtgtttcttgggtcttcccctcggttt 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 tacaaggtttggtccgcataatttcgtctcgacgtgtttcttgggtcttcccctcggttt 956 Query: 163 cttcaccaaatttaccttatgttgtttgatatcacatttattattcgaatgtatcttttt 222 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 955 cttcaccaaatttaccttatgttgtttgatatcacatttattattcgaatgtatcaattt 896 Query: 223 actatactgtcgcaaatccataccaacagaggtgttagggttgagattagcacctgtctt 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 actatactgtcgcaaatccataccaacagaggtgttagggttgagattagcacctgtctt 836 Query: 283 agacattatcaatgtcagtataaccttaaaagtacccctgtttttttacgtcgaaataag 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 agacattatcaatgtcagtataaccttaaaagtacccctgtttttttacgtcgaaataag 776 Query: 343 atgctgaatagcaacaaaggaccctggaaaaatatcaatcaattaaattcaagattaata 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 atgctgaatagcaacaaaggaccctggaaaaatatcaatcaattaaattcaagattaata 716 Query: 403 atgtatttcaccttggatttcagatcaaagacgttaccagttgctgttaacgcgctctat 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 atgtatttcaccttggatttcagatcaaagacgttaccagttgctgttaacgcgctctat 656 Query: 463 tcttgaatattttgtatctaatcatcgtgtttttttaagatgaatcattttcgtttttaa 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 tcttgaatattttgtatctaatcatcgtgtttttttaagatgaatcattttcgtttttaa 596 Query: 523 gtaagtgtgaaagatatatgtccgtcagcaaaaaggcctaattgagtaattacaaggaca 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 gtaagtgtgaaagatatatgtccgtcagcaaaaaggcctaattgagtaattacaaggaca 536 Query: 583 ccaagtgagatataacaaagagatttgggtagatgagggatgagggatttgacggtgtaa 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ccaagtgagatataacaaagagatttgggtagatgagggatgagggatttgacggtgtaa 476 Query: 643 agttgaatgtatggatgtattttgggcttgatatttcaatactttaccttttgcgtgaaa 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 agttgaatgtatggatgtattttgggcttgatatttcaatactttaccttttgcgtgaaa 416 Query: 703 ttctactgtggagtgaggtgacattgcacttttgccgaaagcgt-atacacaatcacctg 761 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 415 ttctactgtggagtgaggtgacattgcacttttgccg-aagcgtaatacacaatcacctg 357 Query: 762 gctttcatagactgacgtgtgtaccatta-taattgactacttaaacccataa--gatgt 818 ||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||| Sbjct: 356 gctttcatagactgacgtgtgtaccattattaattgactacttaaa-caataaaggatgt 298 Query: 819 gatgcanagaagtcgagctggataatttttaatccaagc-tatatatgaaaactcccgaa 877 |||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 297 gatgcaaagaggtcgagctggataatttttaatccaagcatatatatgaaaactccgaaa 238 Query: 878 ggaacctgcccaatnaaatagtcgacgcgttcattaagtatattaggccgtaaaacctg 936 | |||||||||||| |||| |||||||||| || | |||||| |||| ||||||||||| Sbjct: 237 gaaacctgcccaataaaat-gtcgacgcgtacaat-agtataatagg-cgtaaaacctg 182 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6539 Number of Sequences: 1807 Number of extensions: 6539 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)