BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZC10FM1.SCF screened BAC_end (857 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig245 1140 0.0 3x_Contig139 234 2e-61 >3x_Contig245 Length = 1434 Score = 1140 bits (575), Expect = 0.0 Identities = 578/579 (99%) Strand = Plus / Plus Query: 279 acaaggtaccagccaaagctttcaaaaatacaagtttaaggtcaatcagagaagagctga 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 acaaggtaccagccaaagctttcaaaaatacaagtttaaggtcaatcagagaagagctga 508 Query: 339 tcggcaagattatgtctgttgtcgaacaaaaaatgccactaacgagtggaattgcatggg 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 tcggcaagattatgtctgttgtcgaacaaaaaatgccactaacgagtggaattgcatggg 568 Query: 399 gttccagcagtaatagctgtaataactccgctactgataatatccacgctaatatcaatt 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 gttccagcagtaatagctgtaataactccgctactgataatatccacgctaatatcaatt 628 Query: 459 tcaatggtaacttgaacaatgtaactaattccaacatcgttcatgatcaatacggagcac 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 tcaatggtaacttgaacaatgtaactaattccaacatcgttcatgatcaatacggagcac 688 Query: 519 cggtacatcaaagctatagcatagtggcttccacaattggccaaaatacttcgaggccgg 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 cggtacatcaaagctatagcatagtggcttccacaattggccaaaatacttcgaggccgg 748 Query: 579 ttctaccacctctgcatatggctatccatagcccttatggggttcctcctatgatggggg 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ttctaccacctctgcatatggctatccatagcccttatggggttcctcctatgatggggg 808 Query: 639 ctacacactcttcatcatctactgcatcatcactatctatttcttctatggcgacaggat 698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 ctacacactcttcatcatctactgcatcatcactatctatttcttctatggcgacaggat 868 Query: 699 cgtcacccttgttaccattagttcttccacctcctacagcatcagccgaactacaagcca 758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 cgtcacccttgttaccattagttcttccacctcctacagcatcagccgaactacaagcca 928 Query: 759 aaagatcattagataggttcttattcacaggaccagaccataatcaagttcaaacccaga 818 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 aaagatcattagataggttcttattcacaggaccagaccataatcaagttcaaacccaga 988 Query: 819 ctcaaattcattacccaagtcaaggtcattacttcattg 857 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 989 ctcaaattcataacccaagtcaaggtcattacttcattg 1027 >3x_Contig139 Length = 903 Score = 234 bits (118), Expect = 2e-61 Identities = 118/118 (100%) Strand = Plus / Minus Query: 87 ttaatccggccggagacactttacattaacgtgagtaaagtctaacagagagaaagagaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 ttaatccggccggagacactttacattaacgtgagtaaagtctaacagagagaaagagaa 59 Query: 147 tagtcttctatagaacagctttacagtacatggttctacccagggtcttgaaaactta 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 tagtcttctatagaacagctttacagtacatggttctacccagggtcttgaaaactta 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5839 Number of Sequences: 1807 Number of extensions: 5839 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 2 length of query: 857 length of database: 10,358,551 effective HSP length: 16 effective length of query: 841 effective length of database: 10,329,639 effective search space: 8687226399 effective search space used: 8687226399 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)