BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZC12FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1553 1626 0.0 >3x_Contig1553 Length = 8593 Score = 1626 bits (820), Expect = 0.0 Identities = 848/859 (98%) Strand = Plus / Plus Query: 88 gatatgaactggatggtccgtacatgtctaaaaggctatatcaggagtgttaaatatgaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2510 gatatgaactggatggtccgtacatgtctaaaaggctatatcaggagtgttaaatatgaa 2569 Query: 148 tcacaattttatcaatatttattgttcataggaggagtttctcgaattattttatgtacg 207 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2570 tcacaattttatcaatatttattgttcagaggaggagtttctcgaattattttatgtacg 2629 Query: 208 tagatatataancttttnatttgttttgcatttggttctatgtaataacgcattttttat 267 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2630 tagatatataatctatttatttgttttgcatttggttctatgtaataacgcattttttat 2689 Query: 268 cggttggatcaataaattctggcacttctctcttctgcaacatatggatgctctttgtaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2690 cggttggatcaataaattctggcacttctctcttctgcaacatatggatgctctttgtaa 2749 Query: 328 tacttcgcgatgtcaataaaggtttgttttaaacgatccaaaccttcttggtcgatattc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2750 tacttcgcgatgtcaataaaggtttgttttaaacgatccaaaccttcttggtcgatattc 2809 Query: 388 tggtaatggaatgctagtctgccatcccataatctaacattattcttttccgcaaattcc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2810 tggtaatggaatgctagtctgccatcccataatctaacattattcttttccgcaaattcc 2869 Query: 448 aacaagagcttcaatgatatttttgacttagctaaatccacaaatataaaatttgtctca 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2870 aacaagagcttcaatgatatttttgacttagctaaatccacaaatataaaatttgtctca 2929 Query: 508 acaggatgttgtaagaccaattcaaactgatactggtcctttagtgtatggaataaatct 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2930 acaggatgttgtaagaccaattcaaactgatactggtcctttagtgtatggaataaatct 2989 Query: 568 gtccaaaacctgctggtagccttgttaacttcaacaatcctgttcgggaagttgagatca 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2990 gtccaaaacctgctggtagccttgttaacttcaacaatcctgttcgggaagttgagatca 3049 Query: 628 atacagtaattagcaatcttagtgataaacccggcttgtcttataccgccaccttgttgt 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3050 atacagtaattagcaatcttagtgataaacccggcttgtcttataccgccaccttgttgt 3109 Query: 688 ttctgtatgtgcctagctntcttgatgaattgagacgaccccactaacactgaaccaatt 747 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3110 ttctgtatgtgcctagctttcttgatgaattgagacgaccccactaacactgaaccaatt 3169 Query: 748 ggtgctccgatggacttagaaagacagatcgagactgagtccactaattttgacactttt 807 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3170 ggtgctccgatggacttagaaagacagatcgagactgagtccactaattttgacactttt 3229 Query: 808 tgcatgtattctatntcagtctcaaactcccgagaggaaatattagcggcggcggtggcg 867 |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 3230 tgcatgtattctatttcagtctcaaactccgaagaggaattattagcggcggcggtggcg 3289 Query: 868 gcngcagcattccacaatcttgctccatcgagatgaaatttaatgtcttgggaatgagcc 927 || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 3290 gcggcagcattccacaatcttgctccatcgagatgaattttaatgtcttgggaatgagcc 3349 Query: 928 cagtcgctgattctttgaa 946 ||||||||||||||||||| Sbjct: 3350 cagtcgctgattctttgaa 3368 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6231 Number of Sequences: 1807 Number of extensions: 6231 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)