BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC12ZC12RM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1806 1624 0.0 >3x_Contig1806 Length = 53694 Score = 1624 bits (819), Expect = 0.0 Identities = 886/903 (98%), Gaps = 5/903 (0%) Strand = Plus / Minus Query: 47 cttcggtaaatccaattggtgatatggtattcacagaattgtgttactcaaaaaatcgct 106 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 36273 cttcggtaaatccaattggtgatagggtattcacagaattgtgttactcaaaaaatcgct 36214 Query: 107 gtgagcaataaagtatgtgtttggtattttcaattatgcccaatcgaccacctataagag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36213 gtgagcaataaagtatgtgtttggtattttcaattatgcccaatcgaccacctataagag 36154 Query: 167 taatattattcatcactaattactacagcggcttcccggtattattattaggtacttann 226 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 36153 taatattacccatcactaattactacagcggcttcccggtattattattaggtactgatt 36094 Query: 227 nacttctcaaaatatgggaagtgaaattctatcactgggtttaatcgtatttgaaaaata 286 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36093 tacttctcaaaatatgggaagtgaaattctatcactgggtttaatcgtatttgaaaaata 36034 Query: 287 tcatccgctccagtagaaccctttgccaatgtttattgtactattggtgatatataaacg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36033 tcatccgctccagtagaaccctttgccaatgtttattgtactattggtgatatataaacg 35974 Query: 347 ttaattgaattgaagatcttatatgcattcattaaaagagacaccatttacttcctgtta 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35973 ttaattgaattgaagatcttatatgcattcattaaaagagacaccatttacttcctgtta 35914 Query: 407 attttgagtagtaaatttttgttttcgttcattcattcacttttctgtgcaattcatccc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35913 attttgagtagtaaatttttgttttcgttcattcattcacttttctgtgcaattcatccc 35854 Query: 467 ttcatcgcccaactcctgtcctgcaactctgtcggtacggaatatccccatacattaatt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35853 ttcatcgcccaactcctgtcctgcaactctgtcggtacggaatatccccatacattaatt 35794 Query: 527 aaatgagattagaatactattttgcgttggtcgcaactctatggctaactactgtctatg 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35793 aaatgagattagaatactattttgcgttggtcgcaactctatggctaactactgtctatg 35734 Query: 587 cagcttctgaaaaattcggtcttaagcttactggaccaaacgaattaaaaggaatgatga 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35733 cagcttctgaaaaattcggtcttaagcttactggaccaaacgaattaaaaggaatgatga 35674 Query: 647 tttatgaagacggaagctcgctttttattggtaaacattccggtgatatcatagaaggta 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35673 tttatgaagacggaagctcgctttttattggtaaacattccggtgatatcatagaaggta 35614 Query: 707 caattcaagaggatgggtccttgaaattgggcactggagagttcattgggataaacaaga 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35613 caattcaagaggatgggtccttgaaattgggcactggagagttcattgggataaacaaga 35554 Query: 767 actatctaactttaaccactaactatacccaatacgctacgccatttgctatcaatgggg 826 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35553 actatctaactttaaccactaactatacccaatacgctacgccatttgctatcaatgggg 35494 Query: 827 atggatatttgacgctggatggagaaaaag-attcaa-gtcatttcaagcggtcagacag 884 ||||||||||||||||| |||||||||||| |||||| | |||| ||||||||||||||| Sbjct: 35493 atggatatttgacgctgtatggagaaaaagaattcaaggccattccaagcggtcagacag 35434 Query: 885 acatatggattntggctcctaataa-gctgtttc-acattggattc-gtgcacacaacta 941 ||||||||||| ||||| ||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 35433 acatatggattttggcttctaataatgctgtttcaacattggattcggtgcacacaacta 35374 Query: 942 agg 944 ||| Sbjct: 35373 agg 35371 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7161 Number of Sequences: 1807 Number of extensions: 7161 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)