BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC12ZD06FM1.SCF screened BAC_end
         (941 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1709                                                        1554   0.0  

>3x_Contig1709 
          Length = 16948

 Score = 1554 bits (784), Expect = 0.0
 Identities = 805/810 (99%), Gaps = 2/810 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   cagcagccaagaatttccagttggactcagggtcattaggatcgacaaagcctgttggat 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8820 cagcagccaagaatttccagttggactcagggtcattaggatcgacaaagcctgttggat 8761

                                                                        
Query: 146  gaacctgaatttggtccatatcaattaatttagcacctagcctttctagtaaaacctgcc 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8760 gaacctgaatttggtccatatcaattaatttagcacctagcctttctagtaaaacctgcc 8701

                                                                        
Query: 206  cttcacccaaagtctgatcaccgtttgtggttggtaaatcgactagatgtggggcatatt 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8700 cttcacccaaagtctgatcaccgtttgtggttggtaaatcgactagatgtggggcatatt 8641

                                                                        
Query: 266  tttccaacaacttcttgttgaaaccaaatccacctgtacagaacacgacattgtttgttt 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8640 tttccaacaacttcttgttgaaaccaaatccacctgtacagaacacgacattgtttgttt 8581

                                                                        
Query: 326  caatggaatgtgttccttctgaatcctcgtagactacaccatttaccttattattctcat 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8580 caatggaatgtgttccttctgaatcctcgtagactacaccatttaccttattattctcat 8521

                                                                        
Query: 386  caagtttgacatcaattaccttgctattcaattggatcttgacgagatctgcgccatacg 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8520 caagtttgacatcaattaccttgctattcaattggatcttgacgagatctgcgccatacg 8461

                                                                        
Query: 446  attgtaacgattttttcaaagtgtctacaatctggaaaccgggtggcagtttcccgctag 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8460 attgtaacgattttttcaaagtgtctacaatctggaaaccgggtggcagtttcccgctag 8401

                                                                        
Query: 506  atctatgggttcttgaaaccgaatgaccacccaattgggcaagtttatccaacggaatct 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8400 atctatgggttcttgaaaccgaatgaccacccaattgggcaagtttatccaacggaatct 8341

                                                                        
Query: 566  gatgctcagtttgtagccaagaaatagcattcgctgaatctttggccaacttctccatca 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8340 gatgctcagtttgtagccaagaaatagcattcgctgaatctttggccaacttctccatca 8281

                                                                        
Query: 626  atgtcacaatacctttccctctagcagatttgatcgtatcatctgcaaataactccggat 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8280 atgtcacaatacctttccctctagcagatttgatcgtatcatctgcaaataactccggat 8221

                                                                        
Query: 686  tatcaattatcttaagtttttcttgagtgtcggtaccagcaccattaataccgcttgacg 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8220 tatcaattatcttaagtttttcttgagtgtcggtaccagcaccattaataccgcttgacg 8161

                                                                        
Query: 746  ccttgatcgaattaccaccaatgctttctgtcttttccaatanaactattggaatattaa 805
            |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 8160 ccttgatcgaattaccaccaatgcttcctgtcttttccaataaaactattggaatattaa 8101

                                                                        
Query: 806  acttcactagttgggtagaggtcgntaatccagctaatcctgatcctat-actacaac-g 863
            |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |
Sbjct: 8100 acttcactagttgggtagaggtcgttaatccagctaatcctgatcctataactacaacgg 8041

                                          
Query: 864  gtttagacatggttgcttgattctttgaaa 893
            ||||||||||||||||||||||||||||||
Sbjct: 8040 gtttagacatggttgcttgattctttgaaa 8011


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6365
Number of Sequences: 1807
Number of extensions: 6365
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)